TGP content

Species

Number of promoters

Number of genes

1

mouse-ear cress, Arabidopsis thaliana

58

34

2

rice, Oryza sativa

28

19

3

tobacco, Nicotiana tabacum

30

11

4

parsley, Petroselinum crispum

13

5

5

barley, Hordeum vulgare

14

6

6

curled-leaved tobacco, Nicotiana plumbaginifolia

6

2

7

maize, Zea mays

6

4

8

poplar, Populus trichocarpa x Populus deltoides

4

3

9

sweet potato, Ipomeae batatas

6

2

10

swollen duckweed, Lemna gibba

5

1

11

wheat, Triticum aestivum

61

40

12

clove pink, Dianthus caryophyllus

4

1

13

wild potato, Solanum commersonii

2

2

14

potato, Solanum tuberosum

6

4

15

monterey pine, Pinus radiata

4

4

16

pea, Pisum sativum

8

3

17

fava bean, Vicia faba

3

1

18

oat, Avena sativa

3

1

19

pepper, Capsicum annuum

3

1

20

soybean, Glycine max

3

2

21

tomato, Lycopersicon esculentum

9

2

22

alfalfa, Medicago sativa

2

1

23

barrel medic, Medicago truncatula

2

1

24

bean, Phaseolus vulgaris

2

1

25

madagascar periwinkle, Catharanthus roseus

1

1

26

strawberry, Fragaria x ananassa

1

1

27

wheat, Triticum turgidum subspecies durum

5

5

Regulators

Number of promoters

Hormones

1

salicylic acid

23

2

abscisic acid

30

3

jasmonic acid

14

4

ethylene

11

5

auxin

8

6

brassinolide

2

7

gibberellin

5

8

cytokinin

1

Environments

9

cold

33

10

salt (NaCl)

13

11

Pi-starvation

2

12

heat shock

3

13

anaerobic conditions

2

14

dehydration

2

15

flooding

3

16

drought

11

17

osmotic stress (mannitol)

2

Infections

18

elicitor

36

19

tobacco mosaic virus

14

20

wounding

17

21

Heavy metal

12

22

Fe

6

23

Hg

4

24

Cd, Hg, Cu, Zn, Ag, Pb, Co, Mn

1

25

Oxidative stress

6

26

hydrogen peroxide

3

27

paraquat

3

28

DNA damage agent, mitomycin C

2

Light

29

white light

10

30

red light

8

31

far-red light

8

32

UV light

2

33

gamma irradiation

1

34

high light

2

35

blue light

2

Sugar

36

sucrose

11

37

glucose

6

38

sugar deprivation

2

39

senescence

7

40

ripening

3

41

ozone

1

Plant organs and tissues

Number of promoters

1

Seed

51

2

Root

73

3

Leaf

141

4

Embryo

15

5

Endosperm

21

6

Stem

36

7

Vascular

47

8

Shoot

5

9

Flower

29

10

Pollen

25

11

Fruit

4

12

Aleurone

5

13

Epidermis

17

14

Cotyledon

13

15

Parenchyma

6

16

Meristem

10

17

Phloem

16

18

Anther

12

19

Tuber

7

20

Hypocotyl

9

21

Nodule

5

22

Cambium

8

23

Sepal

4

24

Tapetum

4

25

Xylem

10

26

Epicarp

4

27

Ovary

6

28

Coleoptile

7

29

Carpel

2

30

Lemma

10

31

Pericarp

7

32

Stamen

3

33

Glume

7

34

Auricle

1

35

Cortex

2

36

Ligule

1

37

Palea

10

38

Primordia

5

39

Silique

5

40

Stigma

4

41

Inflorescence

10

Target species

Number of promoters

1

tobacco, Nicotiana tabacum

100

2

mouse-ear cress, Arabidopsis thaliana

76

3

rice, Oryza sativa

34

4

parsley, Petroselinum crispum

17

5

barley, Hordeum vulgare

15

6

potato, Solanum tuberosum

8

7

swollen duckweed, Lemna gibba

5

8

maize, Zea mays

9

9

alfalfa, Medicago sativa

3

10

hairy vetch, Vicia hirsuta

3

11

tomato, Lycopersicon esculentum

9

12

soybean, Glycine max

2

13

barrel medic, Medicago truncatula

1

14

poplar, Populus tremula x Populus alba

1

15

strawberry, Fragaria x ananassa

1

16

wheat, Triticum aestivum

26

17

white clover, Trifolium repens

1

18

canola, Brassica napus

1

19

cassava, Manihot esculenta

1

20

chrysanthemum, Dendranthema x grandiflorum

1

21

creeping bentgrass, Agrostis stolonifera

1

22

flax, Linum usitatissimu

1

23

lettuce, Lactuca sativa

1

24

petunia, Petunia x hybrida

3

25

tobacco, Nicotiana alata

1

26

wild potato, Solanum commersoni

2

27

winter barley, Hordeum vulgare

7

28

wheat, Triticum turgidum subspecies durum

4

29

cucumber, Cucumis sativus

1

30

pea, Pisum sativum

1

31

pepper, Capsicum annuum

1

32

rape, Brassica napus

1

33

rye, Secale cereale

1