ARGO

Search for degenerate oligonucleotide motifs

Input the sequence sample to be analysed
Note that the number of sequences should be less than 100. Length of sequences should be less than 100.

Sequence

atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta atggattagcgctagagcgctgagcgcgttccgacatgcag atggattagcgctagagcgctgagcgcgttccgacatgcag cgcgcgcatacagcagctaatcatatacgacagcgcgcgta

Length of oligs
Hamming's distance
Minimal percent of nucleotide seqs having olig	(%)
Minimal binomial probability
Alphabet size
Analysis of complimentary chains

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This resource was developed at Institute of Cytology and Genetics SB RAS, Novosibirsk, Russia

Author: Oleg V. Vishnevsky

Contributors: Vladimir N. Babenko, Anatoly S. Frolov.

Supervisor: Prof. Nikolay A. Kolchanov.