Selex Profiles

These modules are a part of GeneExpress.
SELEX database is available through SRS5.

Retinoid receptor-related Testis-assotiated Receptor, RTR

In vitro randomized/selected oligoDNAs binding to the AHR/ARNT-heterodimer, (without core fixed)

Synthetic oligoDNA in vitro randomized/selected for binding the AHR/ARNT-heterodimer, (with core "GCGTG" fixed)

DNA sequence binding bHLH-zip domain of N-Myc protein

In vitro randomized/selected oligoDNAs binding to the ARNT/ARNT-homodimer, (without core fixed)

Synthetic oligoDNA in vitro randomized/selected for binding the SIM/ARNT-heterodimer, (with core "GCGTG" fixed)

Dowstream DNA sites binding the hXBP protein

Upstream DNA sites binding the hXBP protein

DNA binding the transcription factor YY1, core CCAT

DNA binding the transcription factor YY1, core ACAT

DNA binding Transcription factor MYB.Ph3 (core CnGTTA)

DNA binding the Petunia hybrida Myb.Ph3-protein, Myb-homolog (core: TAACTAAC)

DNA site binding the maize P protein (Myb homolog)

DNA site binding the transcription factor v-Myb

DNA binding the Estrogen-Related Receptor alpha, ERRalpha


Synthetic oligoDNA's binding ADD1-SREBP1 dimer (E-box like) (new)

Synthetic oligoDNA's binding the transcription factor BM2-Myb (Weston,1992) (new)

Synthetic oligoDNA's binding the transcription factor c-Myb (Howe,1991) (new)

Synthetic oligoDNA's binding the transcription factor c-Myb (Weston,1992) (new)

Synthetic oligoDNA's binding Max-Max homodimer (E-box like) (new)

Synthetic oligoDNA's binding cMyc-Max heterodimer (E-box like) (new)

Synthetic oligoDNA's binding the transcription factor v-Myb (Weston,1992) (new)

Plasmid DNA regions binding the transcription factor v-Myb (new)

Synthetic oligoDNA's binding the transcription factor XT-Myb (Weston,1992) (new)

Synthetic oligoDNA's randomized/selected for binding GST-YY1 complex (new)

Synthetic oligoDNA's binding the transcription factor CREB (new)

Synthetic oligoDNA's binding the transcription factor Maf (new)

Synthetic oligoDNA's binding the OCT-2B protein (core:ATGnAAAT) (new)

Synthetic oligoDNA's binding the OCT-2B protein (core:TAATnnnS) (new)

Synthetic oligoDNA's binding the transcription factor Sp1 (new)

Synthetic oligoDNA's binding the Tax-CREB complex (new)

Synthetic oligoDNA's binding the transcription factor v-Jun (new)

Synthetic oligoDNA's binding the transcription factor Ets

Synthetic oligoDNA's binding the [Ets+CBF]-complex

Synthetic oligoDNA's binding the transcription factor MEF-2, muscle ([T+A]-rich site)

Synthetic oligoDNA's binding the transcription factor MEF-2, heart ([T+A]-rich site)

Synthetic oligoDNA's binding the transcription factor MEF-2, brain ([T+A]-rich site)

Synthetic oligoDNA's binding the [RAR+RXR]-heterodimer (RXR-like site)

Synthetic oligoDNA's in vitro selected for binding [E2F1+DP1]-complex

Synthetic oligoDNA's in vitro selected for binding [E2F1+DP2]-complex

Synthetic oligoDNA's in vitro selected for binding [E2F4+DP1]-complex

Synthetic oligoDNA's in vitro selected for binding [E2F4+DP2]-complex

Synthetic oligoDNA's in vitro selected for binding [E2F1+DP1+Rb]-complex


Institute of Cytology and Genetics

This resource has been developed in Institute of Cytology and Genetics. Novosibirsk, Russia

Authors: Julia Ponomarenko, Galine Orlova, Sergey Lavrushev, Svetlana Zybova,
Misha Ponomarenko, Anatoly Frolov, Prof. Kolchanov N.A.