SELEX_DB: Synthetic oligoDNA's binding the transcription factor Ets

Input DNA Sequence :
from Screen:

from DB: Bases Available:
from File:
File formats here.

Select one of 18 Ets-related DNA site recognition model listed below:

(A) Sixteen Ets-binding site recognitions optimized over the Ets SELEXed data:

Ets: Frequency matrix for Homology Score
Ets: Frequency matrix for Information content
Ets: Frequency matrix for Matrix similarity
Ets: Frequency matrix for Sensibility score
Ets: Frequency matrix for Fisher's Linear Discriminant
Ets: Frequency matrix for Free energy change
Ets: Frequency matrix for Chance amount
Ets: Consensus with Homology Score
Ets: Consensus with Information content
Ets: Consensus with Matrix similarity
Ets: Consensus with Sensibility score
Ets: Consensus with Fisher's Linear Discriminant
Ets: Consensus with Free energy change
Ets: Consensus with Chance amount
Ets: Mean Recognition Score
Ets: Mean Recognition Score with Diffution Additive

(B) Two additional TF-site recognition procedutes adapted to the others Ets related Natural and SELEXed data:

Ets: Natural sites Ets
Ets: OligoDNA's SELEXed by [Ets+CBF]-complex

The Institute of Cytology and Genetics (Russia)

This resource has been developed in collaboration between
The Institute of Cytology and Genetics (Novosibirsk, Russia) and The Institute of Physical and Chemical Research, RIKEN (Thukuba, Japan)
that was supported by RFBR grant #98-07-90126 (Russia) and STA Fellow #499042 (Japan)

Author: Julia Ponomarenko, Galine Orlova, Sergey Lavrushev, Svetlana Zybova,
Misha Ponomarenko, Anatoly Frolov,

Supervisors: Nikolay Kolchanov, Prof. and Akinori Sarai, Prof.