[an error occurred while processing this directive]
Enter sequence in FASTA format
Help
Select Database to Search
ASPD amino acid sequences
EST nucleotide sequences
NR amino acid sequences
PDB amino acid sequences
PDB nucleotide sequences
SWISSPROT amino acid sequences
TRRDSITES nucleotide sequences
TRSIG nucleotide sequences
TRRDUNITS nucleotide sequences
Expectation value (E)
X dropoff value for gapped alignment (in bits)
Alignment view options
pairwise
query-anchored showing identities
query-anchored no identities
flat query-anchored, show identities
flat query-anchored, no identities
query-anchored no identities and blunt ends
flat query-anchored, no identities and blunt ends
Penalty for a nucleotide mismatch (blastn only)
Filter query sequence
Number of one-line descriptions
Cost to open a gap
Threshold for extending hits
Cost to extend a gap
Believe the query defline
Show GI's in deflines
Word size
Reward for a nucleotide match (blastn only)
Number of best hits from a region to keep
Number of alignments to show
Effective length of the search space
Perfom gapped alignment
Matrix
BLOSUM45
BLOSUM62
BLOSUM80
PAM30
PAM70
Dropoff (X) for blast extensions in bits
Effective length of the database
X dropoff value for final gapped alignment (in bits)
Use lower case filtering of FASTA sequence
