Site |
Activity |
Scale | Range |
||
quantitative parameter |
min |
max |
|||
Cro-binding site |
association rate constant |
ln |
19.1 |
19.9 |
|
CRP-binding site |
CRP/DNA affinity |
ln |
-3.2 |
3.2 |
|
E. coli promoter |
strength |
-log |
0.26 |
2.1 |
|
C-protein binding site |
trancription activity |
ln |
-6.2 |
1.8 |
|
TATA box |
lifetime |
minute |
1 |
185 |
|
TATA box |
bend |
degree |
33 |
106 |
|
transcription signal INR |
affinity |
ln |
-4.6 |
1.3 |
|
transcription signal OCT-1 |
trancription activity |
ln |
-2.3 |
0.63 |
|
transcription signal USF |
affinity USF/DNA |
ln |
3.8 |
100 |
|
PE1B box (adjacent TATA box) |
trancription activity |
ln |
-1.4 |
1.4 |
|
transcription signal IL-1 |
trancription activity |
ln |
-1.9 |
4.1 |
|
pre-mRNA 3’cleavage site |
cleavage efficiency |
% |
3 |
289 |
|
pre-mRNA 5’splice site |
cleavage efficiency |
% |
18 |
100 |
|
E. coli ribosome-binding site |
translation activity |
ln |
0.0 |
8.06 |
|
2-aminopurine induced hotspots |
mutability |
ln |
0.0 |
5.6 |
|