Approaches to the prediction of the functional activity of sites from their nucleotide sequences
Reference | Site | Activity | Method |
M.E. Mulligan et al., 1984, | E.coli promoter | Association rate | Homology |
Nucleic Acids Res., 12, 789 | Constant, Kbk2 | Score | |
G. Stormo, et al., 1986, | 1) su2-suppression, | Frequency
|
Weigth
|
Nucleic Acids Res., 14, 6661 | 2) 2AP-mutagenesis | Frequency | matrix
|
Berg and von Hippel, 1987, | 1) E.coli promoter, | Constant, Kbk2 | Statistical |
J. Mol. Biol., 193, 723 | 2) CRP-binding site | Affinity | Mechanics |
J. Jonsson et al., 1993, | E.coli promoters | Promoter | Neural |
Nucleic Acids Res., 21, 733 | Strength | networks | |
D. Barrick et al., 1994 | E.coli ribosome | Translation | Multiple |
Nucleic Acids Res., 22, 1287 | Binding site | Activity efficiency | regression |
R.J. Kraus, et al., 1996, | 1) INR-element | Affinity | Neural |
Nucleic Acids Res., 24, 1531 | 2) TATA box | Affinity | networks |