Genome
sequence |
Size,
bp |
Mean
component size |
Maximal
repeat length |
Maximal
repeat type |
Bacteria |
|
|
|
|
A.aeolicus |
1551335 |
11 |
5274 |
I |
A.aureus
MU50 |
2878040 |
11.74 |
6714 |
D |
A.tumefaciens
circ. (Cereon) |
2841581 |
11.4 |
4763 |
I |
A.tumefaciens
circ. (UWASH) |
2841490 |
11.4 |
6743 |
I |
A.tumefaciens
lin. (Cereon) |
2074782 |
11.14 |
1706 |
D |
A.tumefaciens
lin. (UWASH) |
2075560 |
11.14 |
1706 |
D |
A.tumefaciens
plasm. AT (Cereon) |
542869 |
9.89 |
112 |
D |
A.tumefaciens
plasm. AT (UWASH) |
542779 |
9.89 |
112 |
D |
A.tumefaciens.plasm.
Ti (Cereon) |
214233 |
9.14 |
85 |
D |
A.tumefaciens.plasm.
Ti (UWASH) |
214233 |
9.14 |
85 |
D |
Buchnera
sp. |
640681 |
10.82 |
29 |
D |
B.anthracis
str. Ames |
5227293 |
11.99 |
4651 |
D |
B.aphidicola
str. Sg (Schizaphis graminum) |
641454 |
10.94 |
69 |
D |
B.bronchi |
5339179 |
12.63 |
14420 |
I |
B.burgdorferi |
910681 |
11.02 |
1438 |
D |
B.cereus |
5411809 |
12.09 |
5022 |
D |
B.floridanus |
705557 |
10.76 |
277 |
D |
B.halodurans |
4202353 |
11.79 |
5283 |
D |
B.japonicum |
9105828 |
12.71 |
2869 |
I |
B.longum |
2256646 |
11.33 |
3484 |
I |
B.melitensis
(chr I) |
2117136 |
11.17 |
3603 |
D |
B.melitensis
(chr II) |
1177785 |
10.63 |
1239 |
I |
B.paraper |
4773551 |
12.56 |
6073 |
D |
B.pertussis |
4086189 |
13.11 |
6202 |
I |
B.subtilis |
4214814 |
11.55 |
2957 |
D |
B.suisIchr |
2107792 |
11.18 |
6286 |
D |
B.suisIIchr |
1207381 |
10.65 |
1218 |
I |
B.thetaiotamicron |
6260361 |
11.86 |
5913 |
I |
C.acetobutylicum |
3940880 |
12.11 |
4794 |
D |
C.burnetti |
1995275 |
11.15 |
1500 |
D |
C.caviae |
1173390 |
10.56 |
1978 |
I |
C.crescentus |
4016947 |
12.25 |
4075 |
D |
C.glutamicum |
3309400 |
11.37 |
3638 |
D |
C.jejuni |
1641481 |
11.61 |
6089 |
D |
C.muridarum |
1069393 |
10.48 |
1050 |
D |
C.perfringens |
3031430 |
12.21 |
2147 |
D |
C.pneumoniae |
1230230 |
10.59 |
1371 |
D |
C.pneumoniae
AR39 |
1229784 |
10.59 |
1745 |
D |
C.pneumoniae
CWL029 |
1230230 |
10.59 |
1371 |
D |
C.pneumoniae
J138 |
1228266 |
10.57 |
1300 |
D |
C.tepidum |
2154939 |
11.16 |
3403 |
I |
C.tetani |
2799251 |
12.11 |
3863 |
I |
C.trachomatis |
1042519 |
10.45 |
4909 |
D |
C.violacium |
4751080 |
12.39 |
5474 |
D |
D.radiodurans
(chr.1) |
2648577 |
11.95 |
1767 |
I |
D.radiodurans
(chr.2) |
412344 |
10.22 |
535 |
D |
E.coli
CFT073 |
5231148 |
11.86 |
5631 |
D |
E.coli
K12 |
4639221 |
11.7 |
3027 |
D |
E.coli
O157 H7 |
5468733 |
12.25 |
41784 |
D |
E.coli
O157 H7 RIMD |
5498450 |
12.18 |
9439 |
I |
E.faecal |
3218031 |
11.58 |
5285 |
I |
F.nucleatum |
2174499 |
12.25 |
6527 |
I |
G.violaceus |
4659019 |
11.88 |
1671 |
D |
H.ducreyi |
1698955 |
11.32 |
12546 |
D |
H.hepaticus |
1799146 |
11.25 |
1680 |
D |
H.influenzae |
1830023 |
11.28 |
5796 |
I |
H.pylori
26695 |
1667825 |
11.44 |
4852 |
I |
H.pylori
J99 |
1643831 |
11.3 |
4051 |
D |
L.innocua |
3011208 |
11.57 |
10989 |
I |
L.interrogans
(chr.I) |
4332241 |
12.33 |
1897 |
D |
L.interrogans
(chr.II) |
358943 |
10.12 |
1110 |
I |
L.lactis |
2365589 |
11.72 |
5307 |
I |
L.monocytogenes |
2944528 |
11.43 |
5547 |
D |
L.plantarum |
3308274 |
11.38 |
2960 |
D |
M.gallisepticum |
996422 |
11.43 |
2412 |
D |
M.genitalium |
580074 |
10.66 |
243 |
D |
M.leprae |
3268203 |
11.45 |
2401 |
D |
M.loti |
7036074 |
12.32 |
6140 |
D |
M.penetrans |
1358633 |
11.99 |
2352 |
I |
M.pneumoniae |
816394 |
10.85 |
470 |
D |
M.pulmonis |
963879 |
11.58 |
1581 |
D |
M.tuberculosis |
4411529 |
12.08 |
1697 |
D |
Nostoc.sp |
6413771 |
11.99 |
3453 |
I |
N.europaea |
2812094 |
11.46 |
7510 |
D |
N.meningitidis
MC58 |
2272351 |
12.26 |
32158 |
D |
N.meningitidis
Z2491 |
2184406 |
11.97 |
6154 |
I |
O.iheyensis |
3630528 |
11.69 |
9455 |
D |
P.aeruginosa |
6264403 |
12.6 |
5304 |
I |
P.luminescens |
5688987 |
12.4 |
8846 |
D |
P.multocida |
2257487 |
11.21 |
3907 |
I |
Rhizobium.sp |
536187 |
10.3 |
4246 |
D |
R.conorii |
1268755 |
11.06 |
647 |
D |
R.prowazekii |
1111523 |
10.99 |
494 |
D |
Synechocystis
PCC6903 |
3573470 |
11.57 |
5361 |
I |
S.agalactiae
NEM316 |
2211485 |
11.83 |
47069 |
I |
S.agalactiae
TIGR |
2160267 |
11.42 |
5752 |
D |
S.aureus
MW2 |
2820462 |
11.68 |
3274 |
I |
S.aureus
N315 |
2814816 |
11.79 |
6714 |
D |
S.avermitilis |
9025608 |
13.08 |
5257 |
I |
S.coelicolor |
8667507 |
13.26 |
11677 |
I |
S.enterica
Ty2 |
4791950 |
11.7 |
6299 |
D |
S.enterica
Typhi |
4809037 |
11.72 |
7828 |
I |
S.epidermis |
2499279 |
11.69 |
2274 |
D |
S.flexneri
str.2457T |
4599326 |
12.33 |
5169 |
D |
S.flexneri
str.301 |
4607197 |
12.43 |
13489 |
I |
S.meliloti |
3654135 |
11.92 |
6577 |
I |
S.mutans |
2030921 |
11.28 |
5786 |
D |
S.oneidensis
MR1 |
4969795 |
12.03 |
5209 |
I |
S.pneumoniae
R6 |
2038615 |
11.29 |
5911 |
D |
S.pneumoniae
(TIGR) |
2160837 |
11.56 |
5985 |
D |
S.pyogenes
MGAS8232 |
1895017 |
11.26 |
6201 |
I |
S.pyogenes
SF370 |
1852441 |
11.15 |
4107 |
I |
S.pyogenes
SSI1 |
1894275 |
11.19 |
5440 |
D |
S.typhimurium |
4857432 |
11.71 |
5214 |
I |
T.elongatus |
2593857 |
11.48 |
3228 |
D |
T.maritima |
1860725 |
11.01 |
921 |
D |
T.pallidum |
1137944 |
10.5 |
3283 |
D |
T.tengcongensis |
2689445 |
12.02 |
2041 |
D |
T.whipplei |
927303 |
10.61 |
4001 |
D |
U.urealyticum |
751719 |
11.23 |
1452 |
D |
V.cholerae.chrI |
2961116 |
11.29 |
3981 |
D |
V.cholerae.chrII |
1072311 |
10.71 |
1261 |
D |
V.parahaemolyticus
(chr.1) |
3288558 |
11.39 |
5142 |
D |
V.parahaemolyticus
(chr.2) |
1877212 |
10.82 |
721 |
D |
V.vulnificicus
(chr.1) |
3281945 |
11.46 |
3968 |
D |
V.vulnificicus
(chr.2) |
1844853 |
10.76 |
1431 |
D |
W.brevipalpis |
697721 |
11.44 |
4823 |
I |
W.succinogenes |
2110355 |
11.31 |
6195 |
D |
X.axonopodis |
5175554 |
12.24 |
5598 |
D |
X.campestris |
5076172 |
12.37 |
5698 |
D |
X.fastidiosa |
2679305 |
11.43 |
14317 |
D |
X.fastidiosa
Temecula1 |
2519802 |
11.42 |
7465 |
D |
Y.pestis
CO92 |
4653728 |
11.97 |
3159 |
D |
Y.pestis
KIM |
4600755 |
11.91 |
5353 |
I |
Archaebacteria |
|
|
|
|
A.
pernix K1 |
1669695 |
10.84 |
1045 |
I |
A.
fulgidus |
2178400 |
11.11 |
1215 |
D |
Halobacterium
sp. NRC-1 |
2014239 |
11.69 |
1404 |
I |
M.
acetivorans str. C2A |
5751492 |
12.4 |
2485 |
D |
M.
jannaschii |
1664957 |
11.56 |
1018 |
I |
M.
kandleri AV19 |
1694969 |
10.93 |
302 |
I |
M.
mazei strain Goe1 |
4096345 |
11.86 |
1884 |
I |
M.
thermoautotrophicum delta H |
1751377 |
10.96 |
1856 |
D |
P.
abyssi |
1765118 |
10.85 |
873 |
I |
P.aerophilum
strain IM2 |
2222430 |
11.08 |
1295 |
D |
P.
furiosus DSM 3638 |
1908256 |
11.11 |
1350 |
D |
P.
horikoshii OT3 |
1738505 |
10.92 |
623 |
I |
S.
solfataricus |
2992245 |
12.35 |
6521 |
I |
S.
tokodaii |
2694765 |
11.76 |
1460 |
I |
T.
acidophilum |
1564906 |
10.62 |
654 |
D |
T.
volcanium |
1584804 |
10.79 |
809 |
I |
Note: Repeat type (right column): D=Direct I=Inverted
Maximal genome size: 9.1 Mb Bradyrhizobium japonicum, strain USDA110
Maximal repeat length: 47Kb, Streptococcus agalactiae, strain NEM316 (reference) This is inverted repeat.
Genome size and mean component length in decomposition (complexity) have logarithm correlation (0.83) (Statistically significant, at level 0.047). The genome sequences for analysis were downloaded from NCBI server in October 2003.