SELEX_DB: Synthetic oligoDNA's binding cMyc-Max heterodimer (E-box like)

Input DNA Sequence :
from Screen:

from DB: Bases Available:
from File: File formats here.

Select one of 20 cMyc-Max-heterodimer related site recognition model listed below (E-box like):

(A) Sixteen cMyc-Max-heterodimer binding site recognition optimized over the cMyc-Max-heterodimer SELEXed data:

cMyc-Max(E-box like): Frequency matrix for Homology Score
cMyc-Max(E-box like): Frequency matrix for Information content
cMyc-Max(E-box like): Frequency matrix for Matrix similarity
cMyc-Max(E-box like): Frequency matrix for Sensibility score
cMyc-Max(E-box like): Frequency matrix for Fisher's Linear Discriminant
cMyc-Max(E-box like): Frequency matrix for Free energy change
cMyc-Max(E-box like): Frequency matrix for Chance amount
cMyc-Max(E-box like): Consensus with Homology Score
cMyc-Max(E-box like): Consensus with Information content
cMyc-Max(E-box like): Consensus with Matrix similarity
cMyc-Max(E-box like): Consensus with Sensibility score
cMyc-Max(E-box like): Consensus with Fisher's Linear Discriminant
cMyc-Max(E-box like): Consensus with Free energy change
cMyc-Max(E-box like): Consensus with Chance amount
cMyc-Max(E-box like): Mean Recognition Score
cMyc-Max(E-box like): Mean Recognition Score with Diffusion Additive

(B) Four additional TF-site recognition procedutes adapted to the others E-box-like Natural and SELEXed data:

cMyc-Max(E-box like): Natural sites USF (E-box like)
cMyc-Max(E-box like): OligoDNA's SELEXed for binding the ADD1-SREBP1 complex (E-box like)
cMyc-Max(E-box like): OligoDNA's SELEXed for binding the Max/Max-homodimer (E-box like)
cMyc-Max(E-box like): OligoDNA's SELEXed for binding the N-Myc protein (E-box like)

The Institute of Cytology and Genetics (Russia)

This resource has been developed in collaboration between
The Institute of Cytology and Genetics (Novosibirsk, Russia) and The Institute of Physical and Chemical Research, RIKEN (Thukuba, Japan)
that was supported by RFBR grant #98-07-90126 (Russia) and STA Fellow #499042 (Japan)

Author: Julia Ponomarenko, Galine Orlova, Sergey Lavrushev, Svetlana Zybova,
 Misha Ponomarenko, Anatoly Frolov,

Supervisors: Nikolay Kolchanov, Prof. and Akinori Sarai, Prof.