SELEX_DB: DNA site binding the maize P protein (Myb homolog)

Input DNA Sequence :
from Screen:

from DB: Bases Available:
from File: File formats here.

Select one of 25 maize P-protein related DNA site recognition model listed below (Myb-homolog):

(A) Fifteen maize P-protein binding site recognitions optimized over the maize P-protein SELEXed data (Myb-homolog):

P-protein(Myb-homolog): Frequency matrix for Homology Score
P-protein(Myb-homolog): Frequency matrix for Information content
P-protein(Myb-homolog): Frequency matrix for Matrix similarity
P-protein(Myb-homolog): Frequency matrix for Sensibility score
P-protein(Myb-homolog): Frequency matrix for Fisher's Linear Discriminant
P-protein(Myb-homolog): Frequency matrix for Free energy change
P-protein(Myb-homolog): Frequency matrix for Chance amount
P-protein(Myb-homolog): Consensus with Homology Score
P-protein(Myb-homolog): Consensus with Information content
P-protein(Myb-homolog): Consensus with Matrix similarity
P-protein(Myb-homolog): Consensus with Sensibility score
P-protein(Myb-homolog): Consensus with Fisher's Linear Discriminant
P-protein(Myb-homolog): Consensus with Free energy change
P-protein(Myb-homolog): Consensus with Chance amount
P-protein(Myb-homolog): Mean Recognition Score

(B) Ten additional TF-site recognition procedutes adapted to the others Myb-related Natural and SELEXed data:

P-protein(Myb-homolog): Natural sites c-Myb
P-protein(Myb-homolog): OligoDNA's SELEXed by c-Myb protein (Howe,1991)
P-protein(Myb-homolog): OligoDNA's SELEXed by c-Myb protein (Weston,1998)
P-protein(Myb-homolog): OligoDNA's SELEXed by v-Myb protein, viral (Grotewold, 1994)
P-protein(Myb-homolog): OligoDNA's SELEXed by v-Myb protein, viral (Weston et al,1998)
P-protein(Myb-homolog): Plasmidic DNA's selected by v-Myb protein, viral
P-protein(Myb-homolog): OligoDNA's SELEXed by Myb.Ph3-protein (Petunia hybrida, core: TAACnG)
P-protein(Myb-homolog): OligoDNA's SELEXed by Myb.Ph3-protein (Petunia hybrida, core: TAACTAAC)
P-protein(Myb-homolog): OligoDNA's SELEXed by XT-Myb protein
P-protein(Myb-homolog): OligoDNA's SELEXed by BM2-Myb protein

The Institute of Cytology and Genetics (Russia)

This resource has been developed in collaboration between
The Institute of Cytology and Genetics (Novosibirsk, Russia) and The Institute of Physical and Chemical Research, RIKEN (Thukuba, Japan)
that was supported by RFBR grant #98-07-90126 (Russia) and STA Fellow #499042 (Japan)

Author: Julia Ponomarenko, Galine Orlova, Sergey Lavrushev, Svetlana Zybova,
 Misha Ponomarenko, Anatoly Frolov,

Supervisors: Nikolay Kolchanov, Prof. and Akinori Sarai, Prof.