ID DMCOPIAW DE Drosophila copia element from white-apricot allele NM **** 1.(1) POLIMERASE II SQ tATAaa CC max mismatch : 0 AI 00000 1 chain 12 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 197 202 1.25513 0 0: 0 0 TATAAA 2 256 261 1.25513 0 0: 0 0 TATAAA 3 263 268 1.25513 0 0: 0 0 TATAAA 4 1047 1052 1.25513 0 0: 0 0 TATAAA 5 1113 1118 1.25513 0 0: 0 0 TATAAA 6 1173 1178 1.25513 0 0: 0 0 TATAAA 7 1328 1333 1.25513 0 0: 0 0 TATAAA 8 1649 1654 1.25513 0 0: 0 0 TATAAA 9 1992 1997 1.25513 0 0: 0 0 TATAAA 10 5067 5072 1.25513 0 0: 0 0 TATAAA 11 5126 5131 1.25513 0 0: 0 0 TATAAA 12 5133 5138 1.25513 0 0: 0 0 TATAAA AI 00000 2 chain 5 sites find / exp.num. 1.255 interval 3 TD 1 55 50 1.25513 0 0: 0 0 TATAAA 2 3392 3387 1.25513 0 0: 0 0 TATAAA 3 3483 3478 1.25513 0 0: 0 0 TATAAA 4 4672 4667 1.25513 0 0: 0 0 TATAAA 5 4925 4920 1.25513 0 0: 0 0 TATAAA NM **** 2.(1.1) Inr (ripl.POLIMERASE II) SQ NTCAQTY CC max mismatch : 0 AI 00000 1 chain 9 sites find / exp.num. 5.020 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 1954 1960 5.01953 0 0: 0 0 ATCAGTT 2 2044 2050 5.01953 0 0: 0 0 CTCATTT 3 2167 2173 5.01953 0 0: 0 0 CTCAGTT 4 2444 2450 5.01953 0 0: 0 0 ATCATTT 5 3107 3113 5.01953 0 0: 0 0 TTCATTT 6 3623 3629 5.01953 0 0: 0 0 TTCAGTT 7 4263 4269 5.01953 0 0: 0 0 CTCATTT 8 4495 4501 5.01953 0 0: 0 0 ATCATTT 9 4770 4776 5.01953 0 0: 0 0 ATCAGTT AI 00000 2 chain 19 sites find / exp.num. 5.020 interval 9 TD 1 989 983 5.01953 0 0: 0 0 GTCATTT 2 1211 1205 5.01953 0 0: 0 0 TTCATTT 3 1337 1331 5.01953 0 0: 0 0 ATCATTT 4 1451 1445 5.01953 0 0: 0 0 GTCATTC 5 2108 2102 5.01953 0 0: 0 0 CTCATTT 6 2197 2191 5.01953 0 0: 0 0 ATCATTC 7 2510 2504 5.01953 0 0: 0 0 TTCATTT 8 2672 2666 5.01953 0 0: 0 0 CTCATTC 9 2744 2738 5.01953 0 0: 0 0 GTCATTC 10 2780 2774 5.01953 0 0: 0 0 CTCATTC 11 2849 2843 5.01953 0 0: 0 0 CTCATTC 12 2885 2879 5.01953 0 0: 0 0 TTCATTC 13 2912 2906 5.01953 0 0: 0 0 CTCATTC 14 2978 2972 5.01953 0 0: 0 0 ATCATTT 15 3736 3730 5.01953 0 0: 0 0 TTCATTC 16 3779 3773 5.01953 0 0: 0 0 GTCAGTC 17 3788 3782 5.01953 0 0: 0 0 TTCATTT 18 4316 4310 5.01953 0 0: 0 0 TTCAGTT 19 4662 4656 5.01953 0 0: 0 0 TTCATTC NM **** 4.(9a) n=55;found upstream from the promoter of the pheasant conalbu- SQ ggaaa CC max mismatch : 0 AI 00000 1 chain 16 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 251 255 5.02148 0 0: 0 0 GGAAA 2 487 491 5.02148 0 0: 0 0 GGAAA 3 574 578 5.02148 0 0: 0 0 GGAAA 4 1101 1105 5.02148 0 0: 0 0 GGAAA 5 2210 2214 5.02148 0 0: 0 0 GGAAA 6 2427 2431 5.02148 0 0: 0 0 GGAAA 7 2606 2610 5.02148 0 0: 0 0 GGAAA 8 2714 2718 5.02148 0 0: 0 0 GGAAA 9 2749 2753 5.02148 0 0: 0 0 GGAAA 10 2822 2826 5.02148 0 0: 0 0 GGAAA 11 2918 2922 5.02148 0 0: 0 0 GGAAA 12 3276 3280 5.02148 0 0: 0 0 GGAAA 13 3473 3477 5.02148 0 0: 0 0 GGAAA 14 3758 3762 5.02148 0 0: 0 0 GGAAA 15 3887 3891 5.02148 0 0: 0 0 GGAAA 16 5121 5125 5.02148 0 0: 0 0 GGAAA AI 00000 2 chain 8 sites find / exp.num. 5.021 interval 9 TD 1 132 128 5.02148 0 0: 0 0 GGAAA 2 410 406 5.02148 0 0: 0 0 GGAAA 3 1170 1166 5.02148 0 0: 0 0 GGAAA 4 2629 2625 5.02148 0 0: 0 0 GGAAA 5 2737 2733 5.02148 0 0: 0 0 GGAAA 6 3384 3380 5.02148 0 0: 0 0 GGAAA 7 4745 4741 5.02148 0 0: 0 0 GGAAA 8 5002 4998 5.02148 0 0: 0 0 GGAAA NM **** 6.(5) POLY A SINGLE BLOCK SQ AATAAA CC max mismatch : 0 AI 00000 1 chain 12 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 300 305 1.25513 0 0: 0 0 AATAAA 2 335 340 1.25513 0 0: 0 0 AATAAA 3 1191 1196 1.25513 0 0: 0 0 AATAAA 4 1197 1202 1.25513 0 0: 0 0 AATAAA 5 1727 1732 1.25513 0 0: 0 0 AATAAA 6 2616 2621 1.25513 0 0: 0 0 AATAAA 7 2724 2729 1.25513 0 0: 0 0 AATAAA 8 2829 2834 1.25513 0 0: 0 0 AATAAA 9 3060 3065 1.25513 0 0: 0 0 AATAAA 10 3788 3793 1.25513 0 0: 0 0 AATAAA 11 3926 3931 1.25513 0 0: 0 0 AATAAA 12 4167 4172 1.25513 0 0: 0 0 AATAAA AI 00000 2 chain 13 sites find / exp.num. 1.255 interval 3 TD 1 122 117 1.25513 0 0: 0 0 AATAAA 2 236 231 1.25513 0 0: 0 0 AATAAA 3 240 235 1.25513 0 0: 0 0 AATAAA 4 244 239 1.25513 0 0: 0 0 AATAAA 5 1412 1407 1.25513 0 0: 0 0 AATAAA 6 2519 2514 1.25513 0 0: 0 0 AATAAA 7 3803 3798 1.25513 0 0: 0 0 AATAAA 8 4243 4238 1.25513 0 0: 0 0 AATAAA 9 4375 4370 1.25513 0 0: 0 0 AATAAA 10 4992 4987 1.25513 0 0: 0 0 AATAAA 11 5106 5101 1.25513 0 0: 0 0 AATAAA 12 5110 5105 1.25513 0 0: 0 0 AATAAA 13 5114 5109 1.25513 0 0: 0 0 AATAAA NM **** 8.(14b) One of two related variants of a presumed transcription termi SQ tatgt CC max mismatch : 0 AI 00000 1 chain 8 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 1607 1611 5.02148 0 0: 0 0 TATGT 2 1742 1746 5.02148 0 0: 0 0 TATGT 3 2403 2407 5.02148 0 0: 0 0 TATGT 4 3678 3682 5.02148 0 0: 0 0 TATGT 5 3690 3694 5.02148 0 0: 0 0 TATGT 6 3855 3859 5.02148 0 0: 0 0 TATGT 7 4182 4186 5.02148 0 0: 0 0 TATGT 8 4834 4838 5.02148 0 0: 0 0 TATGT AI 00000 2 chain 12 sites find / exp.num. 5.021 interval 9 TD 1 95 91 5.02148 0 0: 0 0 TATGT 2 220 216 5.02148 0 0: 0 0 TATGT 3 2163 2159 5.02148 0 0: 0 0 TATGT 4 2693 2689 5.02148 0 0: 0 0 TATGT 5 2801 2797 5.02148 0 0: 0 0 TATGT 6 3677 3673 5.02148 0 0: 0 0 TATGT 7 4004 4000 5.02148 0 0: 0 0 TATGT 8 4482 4478 5.02148 0 0: 0 0 TATGT 9 4574 4570 5.02148 0 0: 0 0 TATGT 10 4705 4701 5.02148 0 0: 0 0 TATGT 11 4965 4961 5.02148 0 0: 0 0 TATGT 12 5090 5086 5.02148 0 0: 0 0 TATGT NM **** 10.(18) ORI HUM SQ taaatttagt AI 00000 2 chain 2 sites find / exp.num. .152 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3093 3084 .15187 0 1: 1 0 TAAATATAGT 2 3882 3873 .15187 0 1: 1 0 TAAATTTACT NM **** 12.(15) HSV ORI SQ atatatatat CC max mismatch : 1 AI 00000 1 chain 5 sites find / exp.num. .152 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3637 3646 .15187 0 1: 1 0 GTATATATAT 2 3639 3648 .15187 0 1: 1 0 ATATATATTT 3 3675 3684 .15187 0 1: 1 0 ATATATGTAT 4 4668 4677 .15187 0 1: 1 0 TTATATATAT 5 4670 4679 .15187 0 1: 1 0 ATATATATTT AI 00000 2 chain 5 sites find / exp.num. .152 interval 1 TD 1 3646 3637 .15187 0 1: 1 0 ATATATATAC 2 3648 3639 .15187 0 1: 1 0 AAATATATAT 3 3684 3675 .15187 0 1: 1 0 ATACATATAT 4 4677 4668 .15187 0 1: 1 0 ATATATATAA 5 4679 4670 .15187 0 1: 1 0 AAATATATAT NM **** 13.(19) ARS Y XE DM SQ xtttatrtttx CC max mismatch : 1 AI 00000 1 chain 6 sites find / exp.num. .274 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 783 793 .27429 0 1: 1 0 TTTCATATTTT 2 3386 3396 .27429 0 1: 1 0 ATTTATATTGT 3 3639 3649 .27429 0 1: 1 0 ATATATATTTT 4 4666 4676 .27429 0 1: 1 0 TTTTATATATA 5 4670 4680 .27429 0 1: 1 0 ATATATATTTT 6 4831 4841 .27429 0 1: 1 0 TGTTATGTTTT AI 00000 2 chain 14 sites find / exp.num. .274 interval 1 TD 1 203 193 .00980 0 0: 0 0 ATTTATATTTT 2 210 200 .27429 0 1: 1 0 TTTTATGATTT 3 262 252 .27429 0 1: 1 0 ATTTATATTTC 4 269 259 .27429 0 1: 1 0 ATTTATAATTT 5 1668 1658 .27429 0 1: 1 0 TTTTATGCTTA 6 1998 1988 .00980 0 0: 0 0 ATTTATATTTA 7 2624 2614 .27429 0 1: 1 0 ATTTTTATTTT 8 2732 2722 .27429 0 1: 1 0 ATTTTTATTTT 9 3230 3220 .27429 0 1: 1 0 ATTTTTGTTTT 10 3680 3670 .27429 0 1: 1 0 ATATATGTTTT 11 5073 5063 .00980 0 0: 0 0 ATTTATATTTT 12 5080 5070 .27429 0 1: 1 0 TTTTATGATTT 13 5132 5122 .27429 0 1: 1 0 ATTTATATTTC 14 5139 5129 .27429 0 1: 1 0 ATTTATAATTT NM **** 14.(24) ARS yeast, xenopus SQ xttttatrtttx CC max mismatch : 1 AI 00000 1 chain 3 sites find / exp.num. .076 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 782 793 .07591 0 1: 1 0 TTTTCATATTTT 2 4665 4676 .07591 0 1: 1 0 TTTTTATATATA 3 4830 4841 .07591 0 1: 1 0 TTGTTATGTTTT AI 00000 2 chain 1 sites find / exp.num. .076 interval 1 TD 1 1669 1658 .07591 0 1: 1 0 TTTTTATGCTTA NM **** 15.(22) SAR A BOX OF DROSOFILA j mol biol v198 n 4 p677 &cell v46 n4 SQ aataaayaaa CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .284 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 300 309 .28414 0 1: 1 0 AATAAACAAT 2 1197 1206 .28414 0 1: 1 0 AATAAAGAAA AI 00000 2 chain 5 sites find / exp.num. .284 interval 1 TD 1 240 231 .00980 0 0: 0 0 AATAAATAAA 2 244 235 .00980 0 0: 0 0 AATAAATAAA 3 1416 1407 .28414 0 1: 1 0 CATAAATAAA 4 5110 5101 .00980 0 0: 0 0 AATAAATAAA 5 5114 5105 .00980 0 0: 0 0 AATAAATAAA NM **** 16.(23) SAR T BOX OF DROSOFILA cell v46 n4 p521 SQ TtXTxTTXtt CC max mismatch : 0 AI 00000 1 chain 5 sites find / exp.num. .431 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 113 122 .43111 0 1: 1 0 TCTTTTTATT 2 379 388 .43111 0 1: 1 0 TTTTTTTTTC 3 785 794 .43111 0 1: 1 0 TCATATTTTT 4 4833 4842 .43111 0 1: 1 0 TTATGTTTTT 5 4983 4992 .43111 0 1: 1 0 TCTTTTTATT AI 00000 2 chain 1 sites find / exp.num. .039 interval 0 TD 1 1197 1188 .03919 0 0: 0 0 TTTTATTATT NM **** 17(30). initiation of translation in genes of animals SQ zaannatgg CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. .627 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 427 435 .62720 0 0: 0 0 GAAAAATGG 2 1574 1582 .62720 0 0: 0 0 GAAAAATGG 3 2221 2229 .62720 0 0: 0 0 GAACCATGG 4 4077 4085 .62720 0 0: 0 0 GAATTATGG NM **** 18(32).optimal sequence for initiation of translation by eukaryotik SQ accatgg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2223 2229 .31372 0 0: 0 0 ACCATGG AI 00000 2 chain 1 sites find / exp.num. .314 interval 1 TD 1 2230 2224 .31372 0 0: 0 0 ACCATGG NM **** 56(6). POLYMERASE TWO BLOCKS III (NAR V12 N19 p7377) SQ rrynnarygg-gxtcrannc CC distance between two blocks of site: min = 31 max = 41 CC max mismatch in 1-st block: 0, in 2-nd block: 1 AI 00000 1 chain 1 sites find / exp.num. .120 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2170 2225 .12019 37 1: 0 1 AGTTAAATGGtgtttctgagagaatgataagaaccattacggaaaaaGCTCGAACC NM **** 60(11). INTRON-EXON JUNCTION SQ yyyyynyAGG AI 00000 2 chain 6 sites find / exp.num. 1.254 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 30 21 1.25415 0 0: 0 0 TTTTTGTAGG 2 561 552 1.25415 0 0: 0 0 CCTCCTTAGG 3 580 571 1.25415 0 0: 0 0 TTTTTCCAGG 4 4351 4342 1.25415 0 0: 0 0 TCTCTACAGG 5 4557 4548 1.25415 0 0: 0 0 TCTCTGTAGG 6 4900 4891 1.25415 0 0: 0 0 CTTTTGTAGG NM **** 61(12). lar+3' SQ YTaAT-yyyyaG CC distance between two blocks of site: min = 16 max = 36 CC max mismatch in 1-st block: 0, in 2-nd block: 0 AI 00000 1 chain 1 sites find / exp.num. .819 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 2992 3029 .81871 27 0: 0 0 TTAATagaagaagtgagagattaaagactaagCCTCAG AI 00000 2 chain 4 sites find / exp.num. .819 interval 3 TD 1 777 747 .81871 20 0: 0 0 TTAATagtgacatctcactcgatagCTTCAG 2 2995 2968 .81871 17 0: 0 0 TTAATaatttctatgccatcatTTTTAG 3 3402 3367 .81871 25 0: 0 0 CTAATgacaatataaatcggaaacttgaaaTTCTAG 4 4441 4395 .81871 36 0: 0 0 CTAATacagccttgattgtcttcgtaaattttaatggggttTTCTAG NM **** 64(17). ORI MT !!! SQ trtgytytr AI 00000 2 chain 2 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 95 87 .31360 0 0: 0 0 TATGTTTTA 2 4965 4957 .31360 0 0: 0 0 TATGTTTTA NM **** 67(26).ARS-fragment of chlamydomonada SQ raattttaaat CC max mismatch : 1 AI 00000 1 chain 4 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 259 269 .07837 0 1: 1 0 AAATTATAAAT 2 1180 1190 .07837 0 1: 1 0 GAATATTAAAT 3 3865 3875 .07837 0 1: 1 0 AAATTTTAAGT 4 5129 5139 .07837 0 1: 1 0 AAATTATAAAT NM **** 69(28).ARS of human SQ tattyytaaatttagtxt CC max mismatch : 4 AI 00000 1 chain 1 sites find / exp.num. .100 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 482 499 .09953 0 4: 4 0 GATTTGGAAATTTAGAAT AI 00000 2 chain 4 sites find / exp.num. .100 interval 1 TD 1 350 333 .00979 0 3: 3 0 TATTTCACAATTTATTTT 2 987 970 .00979 0 3: 3 0 CATTTTTAATTTTAATTT 3 1671 1654 .09953 0 4: 4 0 TATTTTTATGCTTAGCAT 4 3941 3924 .09953 0 4: 4 0 TAATTCATAATTTATTTT NM **** 70(29).conservative sequence of ORI of adenovirus (AD) SQ cxnymtmxataatataccyyay CC max mismatch : 5 AI 00000 1 chain 2 sites find / exp.num. .355 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 194 215 .35546 0 5: 5 0 AAATATAAATCATAAAACTCAA 2 5064 5085 .35546 0 5: 5 0 AAATATAAATCATAAAACTCAA AI 00000 2 chain 1 sites find / exp.num. .355 interval 2 TD 1 4679 4658 .35546 0 5: 5 0 AAATATATATAAAAAATTTCAT NM **** 71(31).sequence repeated nontandemly several times in the origin of t SQ gcctc CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 1370 1374 5.02148 0 0: 0 0 GCCTC 2 3023 3027 5.02148 0 0: 0 0 GCCTC 3 3979 3983 5.02148 0 0: 0 0 GCCTC 4 4302 4306 5.02148 0 0: 0 0 GCCTC AI 00000 2 chain 1 sites find / exp.num. 5.021 interval 9 TD 1 1531 1527 5.02148 0 0: 0 0 GCCTC NM **** 72(33).consensus sequence of the cores of autonomously replicating SQ xaaayataaax CC max mismatch : 1 AI 00000 1 chain 14 sites find / exp.num. .274 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 193 203 .00980 0 0: 0 0 AAAATATAAAT 2 200 210 .27429 0 1: 1 0 AAATCATAAAA 3 252 262 .27429 0 1: 1 0 GAAATATAAAT 4 259 269 .27429 0 1: 1 0 AAATTATAAAT 5 1658 1668 .27429 0 1: 1 0 TAAGCATAAAA 6 1988 1998 .00980 0 0: 0 0 TAAATATAAAT 7 2614 2624 .27429 0 1: 1 0 AAAATAAAAAT 8 2722 2732 .27429 0 1: 1 0 AAAATAAAAAT 9 3220 3230 .27429 0 1: 1 0 AAAACAAAAAT 10 3670 3680 .27429 0 1: 1 0 AAAACATATAT 11 5063 5073 .00980 0 0: 0 0 AAAATATAAAT 12 5070 5080 .27429 0 1: 1 0 AAATCATAAAA 13 5122 5132 .27429 0 1: 1 0 GAAATATAAAT 14 5129 5139 .27429 0 1: 1 0 AAATTATAAAT AI 00000 2 chain 6 sites find / exp.num. .274 interval 1 TD 1 793 783 .27429 0 1: 1 0 AAAATATGAAA 2 3396 3386 .27429 0 1: 1 0 ACAATATAAAT 3 3649 3639 .27429 0 1: 1 0 AAAATATATAT 4 4676 4666 .27429 0 1: 1 0 TATATATAAAA 5 4680 4670 .27429 0 1: 1 0 AAAATATATAT 6 4841 4831 .27429 0 1: 1 0 AAAACATAACA NM **** 74(2a).Promotor of RNA polymerase 1 (mouse, rat) SQ atcttt-tattg CC distance between two blocks of site: min = 16 max = 19 CC max mismatch in 1-st block: 1, in 2-nd block: 0 AI 00000 1 chain 1 sites find / exp.num. .093 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1944 1972 .00488 18 0: 0 0 ATCTTTgttgatcagtttacacatTATTG NM **** 80(11a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ gggttg AI 00000 2 chain 1 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 2905 2900 1.25513 0 0: 0 0 GGGTTG NM **** 82(13a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ ttgggg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 2258 2263 1.25513 0 0: 0 0 TTGGGG NM **** 83(14a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ ttttgggg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2256 2263 .07841 0 0: 0 0 TTTTGGGG NM **** 95(26a).Consensus sequence of the RNA polymerase III of genes of tRNA SQ rrynnarygg-gxtcrancc CC distance between two blocks of site: min = 31 max = 74 CC max mismatch in 1-st block: 0, in 2-nd block: 1 AI 00000 1 chain 2 sites find / exp.num. .140 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 2170 2225 .13977 37 1: 0 1 AGTTAAATGGtgtttctgagagaatgataagaaccattacggaaaaaGCTCGAACC 2 2473 2549 .13977 58 1: 0 1 AACCCAATGGttttaagttgtgggatgctgtaaatgaaaaatttattgtcgcaagagatgttgttgtcGATGAAACC NM **** 97(28a).consensus sequence of human mitochondrial promoters SQ canaccccaaagaya AI 00000 2 chain 1 sites find / exp.num. .352 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 945 931 .35200 0 3: 3 0 CAAACGCCAATGTCA NM **** 100(32a).consensus of the TATA-box of Dictyostelium promoters SQ tataaaxa CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .157 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1047 1054 .15683 0 0: 0 0 TATAAAAA AI 00000 2 chain 1 sites find / exp.num. .157 interval 1 TD 1 4672 4665 .15683 0 0: 0 0 TATAAAAA NM **** 101(33a)."Goldberg-Hogness box";consensus sequence belonging to eukar SQ tataxax CC max mismatch : 0 AI 00000 1 chain 15 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 197 203 1.25488 0 0: 0 0 TATAAAT 2 256 262 1.25488 0 0: 0 0 TATAAAT 3 263 269 1.25488 0 0: 0 0 TATAAAT 4 1047 1053 1.25488 0 0: 0 0 TATAAAA 5 1173 1179 1.25488 0 0: 0 0 TATAAAA 6 1328 1334 1.25488 0 0: 0 0 TATAAAT 7 1649 1655 1.25488 0 0: 0 0 TATAAAT 8 1992 1998 1.25488 0 0: 0 0 TATAAAT 9 3638 3644 1.25488 0 0: 0 0 TATATAT 10 3640 3646 1.25488 0 0: 0 0 TATATAT 11 4669 4675 1.25488 0 0: 0 0 TATATAT 12 4671 4677 1.25488 0 0: 0 0 TATATAT 13 5067 5073 1.25488 0 0: 0 0 TATAAAT 14 5126 5132 1.25488 0 0: 0 0 TATAAAT 15 5133 5139 1.25488 0 0: 0 0 TATAAAT AI 00000 2 chain 6 sites find / exp.num. 1.255 interval 3 TD 1 3392 3386 1.25488 0 0: 0 0 TATAAAT 2 3483 3477 1.25488 0 0: 0 0 TATAAAT 3 3645 3639 1.25488 0 0: 0 0 TATATAT 4 4672 4666 1.25488 0 0: 0 0 TATAAAA 5 4674 4668 1.25488 0 0: 0 0 TATATAA 6 4676 4670 1.25488 0 0: 0 0 TATATAT NM **** 103(36a).consensus sequence of a tentative transcription initiation SQ aagtta CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 1009 1014 1.25513 0 0: 0 0 AAGTTA AI 00000 2 chain 5 sites find / exp.num. 1.255 interval 3 TD 1 192 187 1.25513 0 0: 0 0 AAGTTA 2 1980 1975 1.25513 0 0: 0 0 AAGTTA 3 3418 3413 1.25513 0 0: 0 0 AAGTTA 4 3742 3737 1.25513 0 0: 0 0 AAGTTA 5 5062 5057 1.25513 0 0: 0 0 AAGTTA NM **** 104(37a).sequence frequently found in the promoter region of histone SQ ccgca AI 00000 2 chain 1 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 1294 1290 5.02148 0 0: 0 0 CCGCA NM **** 113(6b).Sequence located at the 3'-ends of yeast genes,presumably SQ tttttata CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4665 4672 .07841 0 0: 0 0 TTTTTATA AI 00000 2 chain 1 sites find / exp.num. .078 interval 1 TD 1 1054 1047 .07841 0 0: 0 0 TTTTTATA NM **** 121(16b).Consensus of a presumed polyadenylation signal in Trypanosom SQ aaaattyt CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. .157 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2620 2627 .15683 0 0: 0 0 AAAATTTT 2 2728 2735 .15683 0 0: 0 0 AAAATTTT 3 3864 3871 .15683 0 0: 0 0 AAAATTTT AI 00000 2 chain 3 sites find / exp.num. .157 interval 1 TD 1 2627 2620 .15683 0 0: 0 0 AAAATTTT 2 2735 2728 .15683 0 0: 0 0 AAAATTTT 3 3871 3864 .15683 0 0: 0 0 AAAATTTT NM **** 124(22b).Signal of formiration 3'-end in mnRNA SQ gttyn-aaarryaga CC distance between two blocks of site: min = 0 max = 3 CC max mismatch in 1-st block: 0, in 2-nd block: 1 AI 00000 1 chain 2 sites find / exp.num. .108 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 941 956 .00489 2 0: 0 0 GTTTGtgAAAAATAGA 2 2588 2603 .10766 2 1: 0 1 GTTCCtgAAAGATAGT NM **** 126(24b)."Cap box";one of a number of homology blocks at the 5'-ends SQ ycattcr AI 00000 2 chain 9 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 69 63 1.25488 0 0: 0 0 CCATTCA 2 2671 2665 1.25488 0 0: 0 0 TCATTCG 3 2743 2737 1.25488 0 0: 0 0 TCATTCG 4 2779 2773 1.25488 0 0: 0 0 TCATTCG 5 2848 2842 1.25488 0 0: 0 0 TCATTCA 6 2884 2878 1.25488 0 0: 0 0 TCATTCA 7 2911 2905 1.25488 0 0: 0 0 TCATTCG 8 4661 4655 1.25488 0 0: 0 0 TCATTCA 9 4939 4933 1.25488 0 0: 0 0 CCATTCA NM **** 128(26b).Sequence present near the 3'-ends of yeast mitochondrial gen SQ aagaatat CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1178 1185 .07841 0 0: 0 0 AAGAATAT 2 1737 1744 .07841 0 0: 0 0 AAGAATAT NM **** 129(27b).Consensus of a presumed transcription processing signal of m SQ ataatattctt AI 00000 2 chain 2 sites find / exp.num. .042 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 1188 1178 .04163 0 1: 1 0 TTAATATTCTT 2 4830 4820 .04163 0 1: 1 0 ATAATATTCAT NM **** 131(29b).Site of splising of vertebrates 3'-end: PNAS (1984) V 81 N 2 SQ yyyyyncagg AI 00000 2 chain 2 sites find / exp.num. .627 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 580 571 .62708 0 0: 0 0 TTTTTCCAGG 2 4351 4342 .62708 0 0: 0 0 TCTCTACAGG NM **** 132(33b).Brunch : PNAS (1984) V 81 N 23 P 7417 H SQ uacuaac AI 00000 2 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3909 3903 .31372 0 0: 0 0 TACTAAC NM **** 134(35b).Site of splising of plants 3'-end: NAR (1986) V 14 N 24 P 95 SQ tttkttkkkktgcagg AI 00000 2 chain 2 sites find / exp.num. .170 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1040 1025 .17034 0 2: 2 0 ATTATTGTTGTGCACG 2 3231 3216 .17034 0 2: 2 0 TATTTTTGTTTTCAGG NM **** 135(37b).Conservative blocks in selfsplising introns 1 group A: SQ augcuggaaa CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .152 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2497 2506 .15187 0 1: 1 0 ATGCTGTAAA AI 00000 2 chain 1 sites find / exp.num. .152 interval 1 TD 1 1644 1635 .15187 0 1: 1 0 ATGCTTGAAA NM **** 139(41b).Consensus sequence found in the same location in intervening SQ aaaatctt AI 00000 2 chain 1 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2027 2020 .07841 0 0: 0 0 AAAATCTT NM **** 23(19). EMBO J. v4 n10 p2669 H21.3.9 HSV-1/Herpesvirus samuiri SQ taatgarattc CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3113 3123 .07837 0 1: 1 0 TGATGAAATTC NM **** 26(27). LVc MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ cctgc CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 4590 4594 5.02148 0 0: 0 0 CCTGC AI 00000 2 chain 2 sites find / exp.num. 5.021 interval 9 TD 1 1534 1530 5.02148 0 0: 0 0 CCTGC 2 3825 3821 5.02148 0 0: 0 0 CCTGC NM **** 27(33). LYSOZYME SILENCER 4 (EMBO j v6 n8 p2298) SQ atnnAgtaaaa CC max mismatch : 1 AI 00000 1 chain 3 sites find / exp.num. .490 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 3405 3415 .48981 0 1: 1 0 ATACAGTATAA 2 3784 3794 .48981 0 1: 1 0 ATGAAATAAAA 3 3917 3927 .48981 0 1: 1 0 ACCTAGTAAAA NM **** 29(42).Enchanser region of virus PV SQ gctgtgqttttgca AI 00000 2 chain 1 sites find / exp.num. .352 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1239 1226 .35207 0 3: 3 0 CCTGTGATGTTGCA NM **** 35(63).enhancer core SV40 SQ tGTGgxxx CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .627 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 3701 3708 .62732 0 0: 0 0 TGTGGTTA 2 4184 4191 .62732 0 0: 0 0 TGTGGATT NM **** 154(20). Mol.Cel.Biol. v5 n4 p649 H21.3.3 SQ ccaccca CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4797 4803 .31372 0 0: 0 0 CCACCCA NM **** 166(37).Consensus enchanser region of virus SV40 SQ rrtgtggxxx CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .157 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3699 3708 .15677 0 0: 0 0 GATGTGGTTA NM **** 39(26). NFY SQ ccaat CC max mismatch : 0 AI 00000 1 chain 5 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 2476 2480 5.02148 0 0: 0 0 CCAAT 2 2548 2552 5.02148 0 0: 0 0 CCAAT 3 3282 3286 5.02148 0 0: 0 0 CCAAT 4 3845 3849 5.02148 0 0: 0 0 CCAAT 5 4643 4647 5.02148 0 0: 0 0 CCAAT AI 00000 2 chain 7 sites find / exp.num. 5.021 interval 9 TD 1 939 935 5.02148 0 0: 0 0 CCAAT 2 2953 2949 5.02148 0 0: 0 0 CCAAT 3 3306 3302 5.02148 0 0: 0 0 CCAAT 4 3805 3801 5.02148 0 0: 0 0 CCAAT 5 4180 4176 5.02148 0 0: 0 0 CCAAT 6 4199 4195 5.02148 0 0: 0 0 CCAAT 7 4626 4622 5.02148 0 0: 0 0 CCAAT NM **** 40(2). CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.254 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 3965 3975 1.25391 0 0: 0 0 TACCCCATGCC AI 00000 2 chain 3 sites find / exp.num. 1.254 interval 3 TD 1 850 840 1.25391 0 0: 0 0 TTATCCATCTC 2 1288 1278 1.25391 0 0: 0 0 TTGTCCATCAC 3 1718 1708 1.25391 0 0: 0 0 TTTGCCATCGC NM **** 187(2.) CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.254 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 3965 3975 1.25391 0 0: 0 0 TACCCCATGCC AI 00000 2 chain 3 sites find / exp.num. 1.254 interval 3 TD 1 850 840 1.25391 0 0: 0 0 TTATCCATCTC 2 1288 1278 1.25391 0 0: 0 0 TTGTCCATCAC 3 1718 1708 1.25391 0 0: 0 0 TTTGCCATCGC NM **** 192(7). LARGE T PROTEIN OF PAPILLOMA VIRUS SQ xgrggc CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 1526 1531 5.02051 0 0: 0 0 AGAGGC 2 2259 2264 5.02051 0 0: 0 0 TGGGGC AI 00000 2 chain 3 sites find / exp.num. 5.021 interval 9 TD 1 3028 3023 5.02051 0 0: 0 0 TGAGGC 2 3984 3979 5.02051 0 0: 0 0 TGAGGC 3 4307 4302 5.02051 0 0: 0 0 TGAGGC NM **** 193(8). RPG FACTOR SQ tgg-cca CC distance between two blocks of site: min = 7 max = 7 CC max mismatch in 1-st block: 0, in 2-nd block: 0 AI 00000 1 chain 2 sites find / exp.num. 1.253 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 282 294 1.25342 7 0: 0 0 TGGgcccagtCCA 2 3147 3159 1.25342 7 0: 0 0 TGGgaagaagCCA AI 00000 2 chain 2 sites find / exp.num. 1.253 interval 3 TD 1 294 282 1.25342 7 0: 0 0 TGGactgggcCCA 2 3159 3147 1.25342 7 0: 0 0 TGGcttcttcCCA NM **** 203(23).Consensus sequence for cAMP receptor protein (CRP or CAP) SQ aantgtganntnnnnca AI 00000 2 chain 1 sites find / exp.num. .152 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4783 4767 .15166 0 1: 1 0 AAGTGTTAACTGATCCA NM **** 209(30).Site of initiation of translation in genes of animals SQ zaannatgg CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. .627 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 427 435 .62720 0 0: 0 0 GAAAAATGG 2 1574 1582 .62720 0 0: 0 0 GAAAAATGG 3 2221 2229 .62720 0 0: 0 0 GAACCATGG 4 4077 4085 .62720 0 0: 0 0 GAATTATGG NM **** 210(32).Optimal sequence for initiation of translation by eukaryotik SQ accatgg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2223 2229 .31372 0 0: 0 0 ACCATGG AI 00000 2 chain 1 sites find / exp.num. .314 interval 1 TD 1 2230 2224 .31372 0 0: 0 0 ACCATGG NM **** 41(5). HEAt-SHOSK RESPONSIVE ELEMENT SQ ttcnngaa CC max mismatch : 0 AI 00000 1 chain 5 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 2589 2596 1.25464 0 0: 0 0 TTCCTGAA 2 2661 2668 1.25464 0 0: 0 0 TTCCCGAA 3 2697 2704 1.25464 0 0: 0 0 TTCCTGAA 4 2769 2776 1.25464 0 0: 0 0 TTCCCGAA 5 2805 2812 1.25464 0 0: 0 0 TTCCTGAA AI 00000 2 chain 5 sites find / exp.num. 1.255 interval 3 TD 1 2596 2589 1.25464 0 0: 0 0 TTCAGGAA 2 2668 2661 1.25464 0 0: 0 0 TTCGGGAA 3 2704 2697 1.25464 0 0: 0 0 TTCAGGAA 4 2776 2769 1.25464 0 0: 0 0 TTCGGGAA 5 2812 2805 1.25464 0 0: 0 0 TTCAGGAA NM **** 43(22).Heat-shock induction site A SQ cnngaanttcnng CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .078 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3367 3379 .07834 0 0: 0 0 CTAGAATTTCAAG AI 00000 2 chain 1 sites find / exp.num. .078 interval 1 TD 1 3379 3367 .07834 0 0: 0 0 CTTGAAATTCTAG NM **** 46(12). SRE ELEMENT OF HSP70 pnas v84 n8 p2203 H21.30 SQ aagggaaaag CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .152 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3755 3764 .15187 0 1: 1 0 AATGGAAAAG NM **** 48(33).Consensus sequence of the recognition sites for the glucocorti SQ tgttct CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 3068 3073 1.25513 0 0: 0 0 TGTTCT NM **** 52(9). ACUTE REACTANT RESPONSIVE ELEMENT SQ xtZtgGgAx CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .157 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2490 2498 .15680 0 0: 0 0 TTGTGGGAT AI 00000 2 chain 1 sites find / exp.num. .157 interval 1 TD 1 4790 4782 .15680 0 0: 0 0 TTCTGGGAA NM **** 228(29).Element of promotor of interferone GAMMA SQ aagtgtaat-gagtnnnct AI 00000 2 chain 1 sites find / exp.num. .128 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1888 1866 .12765 5 3: 2 1 GAGTGTACTacaaaAAGTGGTCT NM **** 234(3). LIVER-SPECIFIC FACtOR SQ TCntacTC AI 00000 2 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2856 2849 .31366 0 0: 0 0 TCTTACTC NM **** 235(4). CCCAC-BOX BINDING FACTOR SQ cccac CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 4800 4804 5.02148 0 0: 0 0 CCCAC AI 00000 2 chain 3 sites find / exp.num. 5.021 interval 9 TD 1 1901 1897 5.02148 0 0: 0 0 CCCAC 2 2467 2463 5.02148 0 0: 0 0 CCCAC 3 2496 2492 5.02148 0 0: 0 0 CCCAC NM **** 241(10). MHC Y-BOX SQ tqCtgattGGytmm AI 00000 2 chain 1 sites find / exp.num. .093 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3854 3841 .09331 0 2: 2 0 TGCAGATTGGCTTA NM **** 246(15). NF-GMB PROTEIN FOR CYTOKIN 2 SPECIFIC SEQUENCE SQ tyaggrta CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3808 3815 .31366 0 0: 0 0 TTAGGATA NM **** 253(22).cycle histone MCB 85 5 2 380 389 SQ GAYTTC CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 2.510 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1825 1830 2.51025 0 0: 0 0 GACTTC 2 3487 3492 2.51025 0 0: 0 0 GACTTC AI 00000 2 chain 1 sites find / exp.num. 2.510 interval 5 TD 1 3282 3277 2.51025 0 0: 0 0 GATTTC NM **** 254(23). cycle cell 86 45 4 537 544 trt1 SQ GCGAAA CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.255 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 728 733 1.25513 0 0: 0 0 GCGAAA AI 00000 2 chain 1 sites find / exp.num. 1.255 interval 3 TD 1 643 638 1.25513 0 0: 0 0 GCGAAA NM **** 257(26).Regulated element of gene LSP of D.melanogaster EMBO J (1985) V 4 N P 3789 H SQ aaaytaaagctggt CC max mismatch : 3 AI 00000 1 chain 3 sites find / exp.num. .352 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 266 279 .35207 0 3: 3 0 AAATTACAACAGGT 2 318 331 .35207 0 3: 3 0 GAATTAAAGATTGT 3 2052 2065 .35207 0 3: 3 0 AATTTAAAGGTTGT NM **** 258(27).Regulating element of promotor of contractive(KONTRAKTILNIY) SQ cattcct AI 00000 2 chain 3 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1538 1532 .31372 0 0: 0 0 CATTCCT 2 2683 2677 .31372 0 0: 0 0 CATTCCT 3 2791 2785 .31372 0 0: 0 0 CATTCCT NM **** 263(32).Sequence repeated 5 times in the promoter of the mouse SQ gaaga CC max mismatch : 0 AI 00000 1 chain 9 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 837 841 5.02148 0 0: 0 0 GAAGA 2 921 925 5.02148 0 0: 0 0 GAAGA 3 2998 3002 5.02148 0 0: 0 0 GAAGA 4 3042 3046 5.02148 0 0: 0 0 GAAGA 5 3150 3154 5.02148 0 0: 0 0 GAAGA 6 3345 3349 5.02148 0 0: 0 0 GAAGA 7 3825 3829 5.02148 0 0: 0 0 GAAGA 8 3954 3958 5.02148 0 0: 0 0 GAAGA 9 4419 4423 5.02148 0 0: 0 0 GAAGA AI 00000 2 chain 3 sites find / exp.num. 5.021 interval 9 TD 1 1764 1760 5.02148 0 0: 0 0 GAAGA 2 3145 3141 5.02148 0 0: 0 0 GAAGA 3 3625 3621 5.02148 0 0: 0 0 GAAGA NM **** 264(33)."CCAAT box";one of a number of homology blocks at the 5'-ends SQ grccaatnr CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .314 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4641 4649 .31360 0 0: 0 0 GACCAATCG NM **** 266(35).Consensus pd sequense essential for correct transcription of SQ tgcazctgtgnccag CC max mismatch : 3 AI 00000 1 chain 2 sites find / exp.num. .352 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1619 1633 .35200 0 3: 3 0 TGTACCTGTGATCAA 2 3356 3370 .35200 0 3: 3 0 TGCTCCTGTAGCTAG NM **** 268(37).Consensus sequence of repeated hexanucleotides within the 5'- SQ aarqga CC max mismatch : 0 AI 00000 1 chain 18 sites find / exp.num. 5.021 interval 9 TH num begin end exp.num. dist. mismatch site sequence TD 1 248 253 5.02051 0 0: 0 0 AAAGGA 2 806 811 5.02051 0 0: 0 0 AAGTGA 3 983 988 5.02051 0 0: 0 0 AAATGA 4 1098 1103 5.02051 0 0: 0 0 AAGGGA 5 1205 1210 5.02051 0 0: 0 0 AAATGA 6 1261 1266 5.02051 0 0: 0 0 AAGTGA 7 1331 1336 5.02051 0 0: 0 0 AAATGA 8 2102 2107 5.02051 0 0: 0 0 AAATGA 9 2130 2135 5.02051 0 0: 0 0 AAAGGA 10 2504 2509 5.02051 0 0: 0 0 AAATGA 11 2609 2614 5.02051 0 0: 0 0 AAGTGA 12 2717 2722 5.02051 0 0: 0 0 AAGTGA 13 2889 2894 5.02051 0 0: 0 0 AAGGGA 14 2921 2926 5.02051 0 0: 0 0 AAGTGA 15 2972 2977 5.02051 0 0: 0 0 AAATGA 16 3002 3007 5.02051 0 0: 0 0 AAGTGA 17 3782 3787 5.02051 0 0: 0 0 AAATGA 18 5118 5123 5.02051 0 0: 0 0 AAAGGA AI 00000 2 chain 8 sites find / exp.num. 5.021 interval 9 TD 1 1834 1829 5.02051 0 0: 0 0 AAAGGA 2 2050 2045 5.02051 0 0: 0 0 AAATGA 3 2149 2144 5.02051 0 0: 0 0 AAGTGA 4 2450 2445 5.02051 0 0: 0 0 AAATGA 5 3113 3108 5.02051 0 0: 0 0 AAATGA 6 3916 3911 5.02051 0 0: 0 0 AAAGGA 7 4269 4264 5.02051 0 0: 0 0 AAATGA 8 4501 4496 5.02051 0 0: 0 0 AAATGA