ID LHDEL DE Lilium henryi del transposon NM **** 1.(1) POLIMERASE II SQ tATAaa CC max mismatch : 0 AI 00000 1 chain 10 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1022 1027 2.28027 0 0: 0 0 TATAAA 2 1518 1523 2.28027 0 0: 0 0 TATAAA 3 2277 2282 2.28027 0 0: 0 0 TATAAA 4 2385 2390 2.28027 0 0: 0 0 TATAAA 5 3065 3070 2.28027 0 0: 0 0 TATAAA 6 6073 6078 2.28027 0 0: 0 0 TATAAA 7 7952 7957 2.28027 0 0: 0 0 TATAAA 8 8448 8453 2.28027 0 0: 0 0 TATAAA 9 9216 9221 2.28027 0 0: 0 0 TATAAA 10 9324 9329 2.28027 0 0: 0 0 TATAAA AI 00000 2 chain 8 sites find / exp.num. 2.280 interval 5 TD 1 2007 2002 2.28027 0 0: 0 0 TATAAA 2 2280 2275 2.28027 0 0: 0 0 TATAAA 3 2386 2381 2.28027 0 0: 0 0 TATAAA 4 5985 5980 2.28027 0 0: 0 0 TATAAA 5 6289 6284 2.28027 0 0: 0 0 TATAAA 6 8946 8941 2.28027 0 0: 0 0 TATAAA 7 9219 9214 2.28027 0 0: 0 0 TATAAA 8 9325 9320 2.28027 0 0: 0 0 TATAAA NM **** 2.(1.1) Inr (ripl.POLIMERASE II) SQ NTCAQTY CC max mismatch : 0 AI 00000 1 chain 21 sites find / exp.num. 9.120 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 219 225 9.12012 0 0: 0 0 TTCATTT 2 274 280 9.12012 0 0: 0 0 TTCATTT 3 608 614 9.12012 0 0: 0 0 ATCATTT 4 736 742 9.12012 0 0: 0 0 GTCATTT 5 823 829 9.12012 0 0: 0 0 ATCATTT 6 1945 1951 9.12012 0 0: 0 0 TTCATTC 7 2811 2817 9.12012 0 0: 0 0 GTCATTC 8 3593 3599 9.12012 0 0: 0 0 TTCATTT 9 3659 3665 9.12012 0 0: 0 0 ATCAGTT 10 3877 3883 9.12012 0 0: 0 0 TTCATTT 11 4639 4645 9.12012 0 0: 0 0 ATCAGTT 12 5349 5355 9.12012 0 0: 0 0 CTCATTT 13 5788 5794 9.12012 0 0: 0 0 ATCATTC 14 6337 6343 9.12012 0 0: 0 0 ATCATTT 15 6783 6789 9.12012 0 0: 0 0 ATCATTC 16 7149 7155 9.12012 0 0: 0 0 TTCATTT 17 7204 7210 9.12012 0 0: 0 0 TTCATTT 18 7538 7544 9.12012 0 0: 0 0 ATCATTT 19 7666 7672 9.12012 0 0: 0 0 GTCATTT 20 7753 7759 9.12012 0 0: 0 0 ATCATTT 21 8884 8890 9.12012 0 0: 0 0 TTCATTC AI 00000 2 chain 8 sites find / exp.num. 9.120 interval 14 TD 1 112 106 9.12012 0 0: 0 0 TTCATTT 2 550 544 9.12012 0 0: 0 0 GTCATTT 3 1323 1317 9.12012 0 0: 0 0 ATCATTC 4 2525 2519 9.12012 0 0: 0 0 ATCATTT 5 6035 6029 9.12012 0 0: 0 0 ATCAGTT 6 7042 7036 9.12012 0 0: 0 0 TTCATTT 7 7480 7474 9.12012 0 0: 0 0 GTCATTT 8 8253 8247 9.12012 0 0: 0 0 ATCATTC NM **** 3.(38a) "TATA box";one of a number of homology blocks at the 5'-ends SQ gtataaaatag CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .076 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1517 1527 .07567 0 1: 1 0 GTATAAAATAT AI 00000 2 chain 2 sites find / exp.num. .076 interval 1 TD 1 2008 1998 .07567 0 1: 1 0 GTATAAAATAT 2 8947 8937 .07567 0 1: 1 0 GTATAAAATAT NM **** 4.(9a) n=55;found upstream from the promoter of the pheasant conalbu- SQ ggaaa CC max mismatch : 0 AI 00000 1 chain 17 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 69 73 9.12207 0 0: 0 0 GGAAA 2 924 928 9.12207 0 0: 0 0 GGAAA 3 1484 1488 9.12207 0 0: 0 0 GGAAA 4 1575 1579 9.12207 0 0: 0 0 GGAAA 5 1813 1817 9.12207 0 0: 0 0 GGAAA 6 3182 3186 9.12207 0 0: 0 0 GGAAA 7 3262 3266 9.12207 0 0: 0 0 GGAAA 8 3324 3328 9.12207 0 0: 0 0 GGAAA 9 3729 3733 9.12207 0 0: 0 0 GGAAA 10 5295 5299 9.12207 0 0: 0 0 GGAAA 11 5961 5965 9.12207 0 0: 0 0 GGAAA 12 6471 6475 9.12207 0 0: 0 0 GGAAA 13 6999 7003 9.12207 0 0: 0 0 GGAAA 14 7854 7858 9.12207 0 0: 0 0 GGAAA 15 8414 8418 9.12207 0 0: 0 0 GGAAA 16 8514 8518 9.12207 0 0: 0 0 GGAAA 17 8752 8756 9.12207 0 0: 0 0 GGAAA AI 00000 2 chain 18 sites find / exp.num. 9.122 interval 14 TD 1 365 361 9.12207 0 0: 0 0 GGAAA 2 907 903 9.12207 0 0: 0 0 GGAAA 3 2105 2101 9.12207 0 0: 0 0 GGAAA 4 2363 2359 9.12207 0 0: 0 0 GGAAA 5 2479 2475 9.12207 0 0: 0 0 GGAAA 6 2944 2940 9.12207 0 0: 0 0 GGAAA 7 4027 4023 9.12207 0 0: 0 0 GGAAA 8 4431 4427 9.12207 0 0: 0 0 GGAAA 9 4712 4708 9.12207 0 0: 0 0 GGAAA 10 4844 4840 9.12207 0 0: 0 0 GGAAA 11 5279 5275 9.12207 0 0: 0 0 GGAAA 12 5869 5865 9.12207 0 0: 0 0 GGAAA 13 6871 6867 9.12207 0 0: 0 0 GGAAA 14 7295 7291 9.12207 0 0: 0 0 GGAAA 15 7837 7833 9.12207 0 0: 0 0 GGAAA 16 8029 8025 9.12207 0 0: 0 0 GGAAA 17 9044 9040 9.12207 0 0: 0 0 GGAAA 18 9302 9298 9.12207 0 0: 0 0 GGAAA NM **** 6.(5) POLY A SINGLE BLOCK SQ AATAAA CC max mismatch : 0 AI 00000 1 chain 12 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1162 1167 2.28027 0 0: 0 0 AATAAA 2 1569 1574 2.28027 0 0: 0 0 AATAAA 3 1837 1842 2.28027 0 0: 0 0 AATAAA 4 2281 2286 2.28027 0 0: 0 0 AATAAA 5 3965 3970 2.28027 0 0: 0 0 AATAAA 6 4173 4178 2.28027 0 0: 0 0 AATAAA 7 4296 4301 2.28027 0 0: 0 0 AATAAA 8 5696 5701 2.28027 0 0: 0 0 AATAAA 9 8092 8097 2.28027 0 0: 0 0 AATAAA 10 8508 8513 2.28027 0 0: 0 0 AATAAA 11 8776 8781 2.28027 0 0: 0 0 AATAAA 12 9220 9225 2.28027 0 0: 0 0 AATAAA AI 00000 2 chain 28 sites find / exp.num. 2.280 interval 5 TD 1 178 173 2.28027 0 0: 0 0 AATAAA 2 396 391 2.28027 0 0: 0 0 AATAAA 3 447 442 2.28027 0 0: 0 0 AATAAA 4 451 446 2.28027 0 0: 0 0 AATAAA 5 687 682 2.28027 0 0: 0 0 AATAAA 6 729 724 2.28027 0 0: 0 0 AATAAA 7 1311 1306 2.28027 0 0: 0 0 AATAAA 8 1424 1419 2.28027 0 0: 0 0 AATAAA 9 1946 1941 2.28027 0 0: 0 0 AATAAA 10 2087 2082 2.28027 0 0: 0 0 AATAAA 11 2334 2329 2.28027 0 0: 0 0 AATAAA 12 3602 3597 2.28027 0 0: 0 0 AATAAA 13 4187 4182 2.28027 0 0: 0 0 AATAAA 14 4330 4325 2.28027 0 0: 0 0 AATAAA 15 4832 4827 2.28027 0 0: 0 0 AATAAA 16 5184 5179 2.28027 0 0: 0 0 AATAAA 17 5939 5934 2.28027 0 0: 0 0 AATAAA 18 7108 7103 2.28027 0 0: 0 0 AATAAA 19 7326 7321 2.28027 0 0: 0 0 AATAAA 20 7377 7372 2.28027 0 0: 0 0 AATAAA 21 7381 7376 2.28027 0 0: 0 0 AATAAA 22 7617 7612 2.28027 0 0: 0 0 AATAAA 23 7659 7654 2.28027 0 0: 0 0 AATAAA 24 8241 8236 2.28027 0 0: 0 0 AATAAA 25 8354 8349 2.28027 0 0: 0 0 AATAAA 26 8885 8880 2.28027 0 0: 0 0 AATAAA 27 9026 9021 2.28027 0 0: 0 0 AATAAA 28 9273 9268 2.28027 0 0: 0 0 AATAAA NM **** 7.(4) POLY A SIGNAL SQ AATAMA-ygtgttyy CC distance between two blocks of site: min = 20 max = 30 CC max mismatch in 1-st block: 0, in 2-nd block: 1 AI 00000 1 chain 2 sites find / exp.num. .116 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1162 1200 .11594 25 1: 0 1 AATAAAgccatctaagcagattgtgaatcatCGTGCTTT 2 8092 8130 .11594 25 1: 0 1 AATAAAgccatctaagcagattatgaatcatCGTGCTTT NM **** 8.(14b) One of two related variants of a presumed transcription termi SQ tatgt CC max mismatch : 0 AI 00000 1 chain 19 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 96 100 9.12207 0 0: 0 0 TATGT 2 436 440 9.12207 0 0: 0 0 TATGT 3 949 953 9.12207 0 0: 0 0 TATGT 4 1271 1275 9.12207 0 0: 0 0 TATGT 5 1539 1543 9.12207 0 0: 0 0 TATGT 6 2076 2080 9.12207 0 0: 0 0 TATGT 7 2271 2275 9.12207 0 0: 0 0 TATGT 8 2482 2486 9.12207 0 0: 0 0 TATGT 9 4563 4567 9.12207 0 0: 0 0 TATGT 10 5739 5743 9.12207 0 0: 0 0 TATGT 11 6167 6171 9.12207 0 0: 0 0 TATGT 12 6887 6891 9.12207 0 0: 0 0 TATGT 13 7026 7030 9.12207 0 0: 0 0 TATGT 14 7366 7370 9.12207 0 0: 0 0 TATGT 15 7879 7883 9.12207 0 0: 0 0 TATGT 16 8470 8474 9.12207 0 0: 0 0 TATGT 17 8474 8478 9.12207 0 0: 0 0 TATGT 18 8478 8482 9.12207 0 0: 0 0 TATGT 19 9015 9019 9.12207 0 0: 0 0 TATGT AI 00000 2 chain 7 sites find / exp.num. 9.122 interval 14 TD 1 1359 1355 9.12207 0 0: 0 0 TATGT 2 3903 3899 9.12207 0 0: 0 0 TATGT 3 5841 5837 9.12207 0 0: 0 0 TATGT 4 5949 5945 9.12207 0 0: 0 0 TATGT 5 6482 6478 9.12207 0 0: 0 0 TATGT 6 6647 6643 9.12207 0 0: 0 0 TATGT 7 6684 6680 9.12207 0 0: 0 0 TATGT NM **** 10.(18) ORI HUM SQ taaatttagt AI 00000 2 chain 1 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 6051 6042 .27601 0 1: 1 0 TAAATTTTGT NM **** 11.(14) AD ORI SQ ataatatacc AI 00000 2 chain 2 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2069 2060 .27601 0 1: 1 0 ATAATATAAC 2 9008 8999 .27601 0 1: 1 0 ATAATATAAC NM **** 12.(15) HSV ORI SQ atatatatat CC max mismatch : 1 AI 00000 1 chain 24 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1522 1531 .27601 0 1: 1 0 AAATATATAT 2 1524 1533 .00890 0 0: 0 0 ATATATATAT 3 1526 1535 .00890 0 0: 0 0 ATATATATAT 4 1528 1537 .00890 0 0: 0 0 ATATATATAT 5 1530 1539 .00890 0 0: 0 0 ATATATATAT 6 1532 1541 .00890 0 0: 0 0 ATATATATAT 7 1534 1543 .27601 0 1: 1 0 ATATATATGT 8 1536 1545 .27601 0 1: 1 0 ATATATGTAT 9 1538 1547 .27601 0 1: 1 0 ATATGTATAT 10 1540 1549 .27601 0 1: 1 0 ATGTATATAT 11 1929 1938 .27601 0 1: 1 0 TTATATATAT 12 3064 3073 .27601 0 1: 1 0 ATATAAATAT 13 8449 8458 .27601 0 1: 1 0 ATAAATATAT 14 8451 8460 .27601 0 1: 1 0 AAATATATAT 15 8453 8462 .00890 0 0: 0 0 ATATATATAT 16 8455 8464 .00890 0 0: 0 0 ATATATATAT 17 8457 8466 .00890 0 0: 0 0 ATATATATAT 18 8459 8468 .00890 0 0: 0 0 ATATATATAT 19 8461 8470 .00890 0 0: 0 0 ATATATATAT 20 8463 8472 .00890 0 0: 0 0 ATATATATAT 21 8465 8474 .27601 0 1: 1 0 ATATATATGT 22 8467 8476 .27601 0 1: 1 0 ATATATGTAT 23 8479 8488 .27601 0 1: 1 0 ATGTATATAT 24 8868 8877 .27601 0 1: 1 0 TTATATATAT AI 00000 2 chain 24 sites find / exp.num. .276 interval 1 TD 1 1531 1522 .27601 0 1: 1 0 ATATATATTT 2 1533 1524 .00890 0 0: 0 0 ATATATATAT 3 1535 1526 .00890 0 0: 0 0 ATATATATAT 4 1537 1528 .00890 0 0: 0 0 ATATATATAT 5 1539 1530 .00890 0 0: 0 0 ATATATATAT 6 1541 1532 .00890 0 0: 0 0 ATATATATAT 7 1543 1534 .27601 0 1: 1 0 ACATATATAT 8 1545 1536 .27601 0 1: 1 0 ATACATATAT 9 1547 1538 .27601 0 1: 1 0 ATATACATAT 10 1549 1540 .27601 0 1: 1 0 ATATATACAT 11 1938 1929 .27601 0 1: 1 0 ATATATATAA 12 3073 3064 .27601 0 1: 1 0 ATATTTATAT 13 8458 8449 .27601 0 1: 1 0 ATATATTTAT 14 8460 8451 .27601 0 1: 1 0 ATATATATTT 15 8462 8453 .00890 0 0: 0 0 ATATATATAT 16 8464 8455 .00890 0 0: 0 0 ATATATATAT 17 8466 8457 .00890 0 0: 0 0 ATATATATAT 18 8468 8459 .00890 0 0: 0 0 ATATATATAT 19 8470 8461 .00890 0 0: 0 0 ATATATATAT 20 8472 8463 .00890 0 0: 0 0 ATATATATAT 21 8474 8465 .27601 0 1: 1 0 ACATATATAT 22 8476 8467 .27601 0 1: 1 0 ATACATATAT 23 8488 8479 .27601 0 1: 1 0 ATATATACAT 24 8877 8868 .27601 0 1: 1 0 ATATATATAA NM **** 13.(19) ARS Y XE DM SQ xtttatrtttx CC max mismatch : 1 AI 00000 1 chain 3 sites find / exp.num. .499 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 2268 2278 .49854 0 1: 1 0 TGTTATGTTTA 2 2288 2298 .49854 0 1: 1 0 TTGTATATTTT 3 9227 9237 .49854 0 1: 1 0 TTGTATATTTT AI 00000 2 chain 4 sites find / exp.num. .499 interval 2 TD 1 1531 1521 .49854 0 1: 1 0 ATATATATTTT 2 3071 3061 .49854 0 1: 1 0 ATTTATATCTA 3 5211 5201 .49854 0 1: 1 0 TTATATATTTT 4 8460 8450 .49854 0 1: 1 0 ATATATATTTA NM **** 15.(22) SAR A BOX OF DROSOFILA j mol biol v198 n 4 p677 &cell v46 n4 SQ aataaayaaa AI 00000 2 chain 2 sites find / exp.num. .018 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 451 442 .01781 0 0: 0 0 AATAAATAAA 2 7381 7372 .01781 0 0: 0 0 AATAAATAAA NM **** 16.(23) SAR T BOX OF DROSOFILA cell v46 n4 p521 SQ TtXTxTTXtt CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .071 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2061 2070 .07123 0 0: 0 0 TTATATTATT 2 9000 9009 .07123 0 0: 0 0 TTATATTATT NM **** 17(30). initiation of translation in genes of animals SQ zaannatgg AI 00000 2 chain 5 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 160 152 1.13977 0 0: 0 0 CAAATATGG 2 2104 2096 1.13977 0 0: 0 0 GAAAAATGG 3 7090 7082 1.13977 0 0: 0 0 CAAATATGG 4 7313 7305 1.13977 0 0: 0 0 CAATTATGG 5 9043 9035 1.13977 0 0: 0 0 GAAAAATGG NM **** 18(32).optimal sequence for initiation of translation by eukaryotik SQ accatgg AI 00000 2 chain 2 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 2113 2107 .57001 0 0: 0 0 ACCATGG 2 9052 9046 .57001 0 0: 0 0 ACCATGG NM **** 60(11). INTRON-EXON JUNCTION SQ yyyyynyAGG CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 2.279 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 3316 3325 2.27930 0 0: 0 0 TCTCTCCAGG 2 4307 4316 2.27930 0 0: 0 0 TCTTCCTAGG 3 6539 6548 2.27930 0 0: 0 0 CTCTCCCAGG 4 6877 6886 2.27930 0 0: 0 0 TTTTCTCAGG AI 00000 2 chain 2 sites find / exp.num. 2.279 interval 5 TD 1 6507 6498 2.27930 0 0: 0 0 CCTTTCTAGG 2 6733 6724 2.27930 0 0: 0 0 TCTTCATAGG NM **** 61(12). lar+3' SQ YTaAT-yyyyaG CC distance between two blocks of site: min = 16 max = 36 CC max mismatch in 1-st block: 0, in 2-nd block: 0 AI 00000 1 chain 1 sites find / exp.num. 1.491 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 3286 3324 1.49146 28 0: 0 0 CTAATgataaatctcagtgtccaaatcctctctCTCCAG AI 00000 2 chain 4 sites find / exp.num. 1.491 interval 4 TD 1 731 701 1.49146 20 0: 0 0 TTAATaaatgtttgaagagactagtCTTTAG 2 4834 4800 1.49146 24 0: 0 0 TTAATaaaccttctataatagccagctagTCCCAG 3 5262 5232 1.49146 20 0: 0 0 TTAATacttcaatccatcaccgttgCCTTAG 4 7661 7631 1.49146 20 0: 0 0 TTAATaaatgtttgaagagactagtCTTTAG NM **** 64(17). ORI MT !!! SQ trtgytytr AI 00000 2 chain 2 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 766 758 .56989 0 0: 0 0 TATGCTTTG 2 7696 7688 .56989 0 0: 0 0 TATGCTTTG NM **** 67(26).ARS-fragment of chlamydomonada SQ raattttaaat CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4065 4075 .14244 0 1: 1 0 GAATTTCAAAT 2 4886 4896 .14244 0 1: 1 0 AAATTTTAATT AI 00000 2 chain 4 sites find / exp.num. .142 interval 1 TD 1 166 156 .14244 0 1: 1 0 GAATTTCAAAT 2 244 234 .14244 0 1: 1 0 AAATTTTAAGT 3 7096 7086 .14244 0 1: 1 0 GAATTTCAAAT 4 7174 7164 .14244 0 1: 1 0 AAATTTTAAGT NM **** 69(28).ARS of human SQ tattyytaaatttagtxt CC max mismatch : 4 AI 00000 1 chain 3 sites find / exp.num. .181 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 672 689 .18101 0 4: 4 0 TATTAGTACATTTATTAT 2 4355 4372 .18101 0 4: 4 0 TTTTTCTAAAATTGATTT 3 7602 7619 .18101 0 4: 4 0 TATTAGTACATTTATTAT AI 00000 2 chain 1 sites find / exp.num. .181 interval 1 TD 1 3151 3134 .18101 0 4: 4 0 TAATCTTTAATTAAGTGT NM **** 70(29).conservative sequence of ORI of adenovirus (AD) SQ cxnymtmxataatataccyyay CC max mismatch : 4 AI 00000 1 chain 1 sites find / exp.num. .085 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3639 3660 .08530 0 4: 4 0 CAACCTCTAGGCTATATCCTAT NM **** 71(31).sequence repeated nontandemly several times in the origin of t SQ gcctc CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 2820 2824 9.12207 0 0: 0 0 GCCTC 2 5004 5008 9.12207 0 0: 0 0 GCCTC 3 6753 6757 9.12207 0 0: 0 0 GCCTC AI 00000 2 chain 4 sites find / exp.num. 9.122 interval 14 TD 1 3205 3201 9.12207 0 0: 0 0 GCCTC 2 5151 5147 9.12207 0 0: 0 0 GCCTC 3 6850 6846 9.12207 0 0: 0 0 GCCTC 4 8284 8280 9.12207 0 0: 0 0 GCCTC NM **** 72(33).consensus sequence of the cores of autonomously replicating SQ xaaayataaax CC max mismatch : 1 AI 00000 1 chain 4 sites find / exp.num. .499 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 1521 1531 .49854 0 1: 1 0 AAAATATATAT 2 3061 3071 .49854 0 1: 1 0 TAGATATAAAT 3 5201 5211 .49854 0 1: 1 0 AAAATATATAA 4 8450 8460 .49854 0 1: 1 0 TAAATATATAT AI 00000 2 chain 3 sites find / exp.num. .499 interval 2 TD 1 2278 2268 .49854 0 1: 1 0 TAAACATAACA 2 2298 2288 .49854 0 1: 1 0 AAAATATACAA 3 9237 9227 .49854 0 1: 1 0 AAAATATACAA NM **** 74(2a).Promotor of RNA polymerase 1 (mouse, rat) SQ atcttt-tattg CC distance between two blocks of site: min = 16 max = 19 CC max mismatch in 1-st block: 1, in 2-nd block: 0 AI 00000 1 chain 2 sites find / exp.num. .169 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 89 117 .16883 18 1: 1 0 TTCTTTttatgtgatcaaaatgaaTATTG 2 7019 7047 .16883 18 1: 1 0 TTCTTTttatgtgatcaaaatgaaTATTG NM **** 75(3a).Promotor of RNA polymerase 1 (human) SQ atcttt-ttttgg CC distance between two blocks of site: min = 18 max = 22 CC max mismatch in 1-st block: 1, in 2-nd block: 0 AI 00000 1 chain 2 sites find / exp.num. .053 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1338 1370 .05274 21 1: 1 0 ATATTTtcgttcgaggtacataaattcTTTTGG 2 8268 8300 .00278 21 0: 0 0 ATCTTTtcgttcgaggcgcataaattcTTTTGG AI 00000 2 chain 1 sites find / exp.num. .053 interval 1 TD 1 4615 4586 .05274 18 1: 1 0 ATCCTTaagtgatgttcatggtctTTTTGG NM **** 80(11a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ gggttg CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 2217 2222 2.28027 0 0: 0 0 GGGTTG 2 5047 5052 2.28027 0 0: 0 0 GGGTTG 3 9156 9161 2.28027 0 0: 0 0 GGGTTG AI 00000 2 chain 2 sites find / exp.num. 2.280 interval 5 TD 1 3932 3927 2.28027 0 0: 0 0 GGGTTG 2 6715 6710 2.28027 0 0: 0 0 GGGTTG NM **** 81(12a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ gggttttg CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1475 1482 .14249 0 0: 0 0 GGGTTTTG 2 8405 8412 .14249 0 0: 0 0 GGGTTTTG NM **** 82(13a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ ttgggg CC max mismatch : 0 AI 00000 1 chain 9 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1480 1485 2.28027 0 0: 0 0 TTGGGG 2 2129 2134 2.28027 0 0: 0 0 TTGGGG 3 2204 2209 2.28027 0 0: 0 0 TTGGGG 4 4205 4210 2.28027 0 0: 0 0 TTGGGG 5 6062 6067 2.28027 0 0: 0 0 TTGGGG 6 6916 6921 2.28027 0 0: 0 0 TTGGGG 7 8410 8415 2.28027 0 0: 0 0 TTGGGG 8 9068 9073 2.28027 0 0: 0 0 TTGGGG 9 9143 9148 2.28027 0 0: 0 0 TTGGGG AI 00000 2 chain 2 sites find / exp.num. 2.280 interval 5 TD 1 1617 1612 2.28027 0 0: 0 0 TTGGGG 2 8556 8551 2.28027 0 0: 0 0 TTGGGG NM **** 83(14a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ ttttgggg CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1478 1485 .14249 0 0: 0 0 TTTTGGGG 2 6060 6067 .14249 0 0: 0 0 TTTTGGGG 3 6914 6921 .14249 0 0: 0 0 TTTTGGGG 4 8408 8415 .14249 0 0: 0 0 TTTTGGGG NM **** 85(16a).one of two suggested consensus sequences for RNA-polymerase I SQ ggttgg AI 00000 2 chain 1 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 5457 5452 2.28027 0 0: 0 0 GGTTGG NM **** 87(18a).one of two suggested consensus sequences for RNA-polymerase I SQ ggttttgg CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1476 1483 .14249 0 0: 0 0 GGTTTTGG 2 8406 8413 .14249 0 0: 0 0 GGTTTTGG AI 00000 2 chain 2 sites find / exp.num. .142 interval 1 TD 1 371 364 .14249 0 0: 0 0 GGTTTTGG 2 7301 7294 .14249 0 0: 0 0 GGTTTTGG NM **** 92(23a).consensus sequence near the 5'-ends of the adenovirus 2 genes SQ gtgtacatatatatacatatatgt CC max mismatch : 4 AI 00000 1 chain 1 sites find / exp.num. .000 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 8447 8470 .00003 0 4: 4 0 GTATAAATATATATATATATATAT AI 00000 2 chain 1 sites find / exp.num. .000 interval 0 TD 1 1547 1524 .00003 0 4: 4 0 ATATACATATATATATATATATAT NM **** 99(31a).putative regulatory sequence(promoter element) present in SQ gggnggrr CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 6918 6925 2.27979 0 0: 0 0 GGGGGGGA 2 6919 6926 2.27979 0 0: 0 0 GGGGGGAA AI 00000 2 chain 6 sites find / exp.num. 2.280 interval 5 TD 1 817 810 2.27979 0 0: 0 0 GGGAGGAA 2 1071 1064 2.27979 0 0: 0 0 GGGAGGAG 3 2349 2342 2.27979 0 0: 0 0 GGGAGGGA 4 7747 7740 2.27979 0 0: 0 0 GGGAGGAA 5 8001 7994 2.27979 0 0: 0 0 GGGAGGAG 6 9288 9281 2.27979 0 0: 0 0 GGGAGGGA NM **** 100(32a).consensus of the TATA-box of Dictyostelium promoters SQ tataaaxa CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1022 1029 .28497 0 0: 0 0 TATAAATA 2 2277 2284 .28497 0 0: 0 0 TATAAATA 3 3065 3072 .28497 0 0: 0 0 TATAAATA 4 7952 7959 .28497 0 0: 0 0 TATAAATA 5 8448 8455 .28497 0 0: 0 0 TATAAATA 6 9216 9223 .28497 0 0: 0 0 TATAAATA AI 00000 2 chain 2 sites find / exp.num. .285 interval 1 TD 1 2386 2379 .28497 0 0: 0 0 TATAAAAA 2 9325 9318 .28497 0 0: 0 0 TATAAAAA NM **** 101(33a)."Goldberg-Hogness box";consensus sequence belonging to eukar SQ tataxax CC max mismatch : 0 AI 00000 1 chain 32 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1022 1028 2.28003 0 0: 0 0 TATAAAT 2 1518 1524 2.28003 0 0: 0 0 TATAAAA 3 1525 1531 2.28003 0 0: 0 0 TATATAT 4 1527 1533 2.28003 0 0: 0 0 TATATAT 5 1529 1535 2.28003 0 0: 0 0 TATATAT 6 1531 1537 2.28003 0 0: 0 0 TATATAT 7 1533 1539 2.28003 0 0: 0 0 TATATAT 8 1535 1541 2.28003 0 0: 0 0 TATATAT 9 1543 1549 2.28003 0 0: 0 0 TATATAT 10 1930 1936 2.28003 0 0: 0 0 TATATAT 11 1932 1938 2.28003 0 0: 0 0 TATATAT 12 2277 2283 2.28003 0 0: 0 0 TATAAAT 13 2383 2389 2.28003 0 0: 0 0 TATATAA 14 2385 2391 2.28003 0 0: 0 0 TATAAAA 15 3065 3071 2.28003 0 0: 0 0 TATAAAT 16 5205 5211 2.28003 0 0: 0 0 TATATAA 17 6073 6079 2.28003 0 0: 0 0 TATAAAA 18 7952 7958 2.28003 0 0: 0 0 TATAAAT 19 8448 8454 2.28003 0 0: 0 0 TATAAAT 20 8454 8460 2.28003 0 0: 0 0 TATATAT 21 8456 8462 2.28003 0 0: 0 0 TATATAT 22 8458 8464 2.28003 0 0: 0 0 TATATAT 23 8460 8466 2.28003 0 0: 0 0 TATATAT 24 8462 8468 2.28003 0 0: 0 0 TATATAT 25 8464 8470 2.28003 0 0: 0 0 TATATAT 26 8466 8472 2.28003 0 0: 0 0 TATATAT 27 8482 8488 2.28003 0 0: 0 0 TATATAT 28 8869 8875 2.28003 0 0: 0 0 TATATAT 29 8871 8877 2.28003 0 0: 0 0 TATATAT 30 9216 9222 2.28003 0 0: 0 0 TATAAAT 31 9322 9328 2.28003 0 0: 0 0 TATATAA 32 9324 9330 2.28003 0 0: 0 0 TATAAAA AI 00000 2 chain 24 sites find / exp.num. 2.280 interval 5 TD 1 1530 1524 2.28003 0 0: 0 0 TATATAT 2 1532 1526 2.28003 0 0: 0 0 TATATAT 3 1534 1528 2.28003 0 0: 0 0 TATATAT 4 1536 1530 2.28003 0 0: 0 0 TATATAT 5 1538 1532 2.28003 0 0: 0 0 TATATAT 6 1540 1534 2.28003 0 0: 0 0 TATATAT 7 1935 1929 2.28003 0 0: 0 0 TATATAA 8 1937 1931 2.28003 0 0: 0 0 TATATAT 9 2007 2001 2.28003 0 0: 0 0 TATAAAA 10 2386 2380 2.28003 0 0: 0 0 TATAAAA 11 2388 2382 2.28003 0 0: 0 0 TATATAA 12 5210 5204 2.28003 0 0: 0 0 TATATAT 13 8459 8453 2.28003 0 0: 0 0 TATATAT 14 8461 8455 2.28003 0 0: 0 0 TATATAT 15 8463 8457 2.28003 0 0: 0 0 TATATAT 16 8465 8459 2.28003 0 0: 0 0 TATATAT 17 8467 8461 2.28003 0 0: 0 0 TATATAT 18 8469 8463 2.28003 0 0: 0 0 TATATAT 19 8471 8465 2.28003 0 0: 0 0 TATATAT 20 8874 8868 2.28003 0 0: 0 0 TATATAA 21 8876 8870 2.28003 0 0: 0 0 TATATAT 22 8946 8940 2.28003 0 0: 0 0 TATAAAA 23 9325 9319 2.28003 0 0: 0 0 TATAAAA 24 9327 9321 2.28003 0 0: 0 0 TATATAA NM **** 103(36a).consensus sequence of a tentative transcription initiation SQ aagtta CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1241 1246 2.28027 0 0: 0 0 AAGTTA 2 1846 1851 2.28027 0 0: 0 0 AAGTTA 3 3157 3162 2.28027 0 0: 0 0 AAGTTA 4 5767 5772 2.28027 0 0: 0 0 AAGTTA 5 8171 8176 2.28027 0 0: 0 0 AAGTTA 6 8785 8790 2.28027 0 0: 0 0 AAGTTA AI 00000 2 chain 2 sites find / exp.num. 2.280 interval 5 TD 1 5981 5976 2.28027 0 0: 0 0 AAGTTA 2 8330 8325 2.28027 0 0: 0 0 AAGTTA NM **** 104(37a).sequence frequently found in the promoter region of histone SQ ccgca CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 2164 2168 9.12207 0 0: 0 0 CCGCA 2 9103 9107 9.12207 0 0: 0 0 CCGCA NM **** 108(1b).Binding-site for factor NFI, which stimulates replication SQ tggmn-gccaa 00000 2 chain 2 sites find / exp.num. .285 interval 1 num begin end exp.num. dist. mismatch site sequence 1 2587 2574 .28477 4 0: 0 0 TGGAGtacgGCCAA 2 3960 3945 .28477 6 0: 0 0 TGGCCaagcttGCCAA NM **** 113(6b).Sequence located at the 3'-ends of yeast genes,presumably SQ tttttata CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2379 2386 .14249 0 0: 0 0 TTTTTATA 2 9318 9325 .14249 0 0: 0 0 TTTTTATA NM **** 121(16b).Consensus of a presumed polyadenylation signal in Trypanosom SQ aaaattyt CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 238 245 .28497 0 0: 0 0 AAAATTTT 2 2772 2779 .28497 0 0: 0 0 AAAATTTT 3 2933 2940 .28497 0 0: 0 0 AAAATTCT 4 4688 4695 .28497 0 0: 0 0 AAAATTCT 5 4885 4892 .28497 0 0: 0 0 AAAATTTT 6 7168 7175 .28497 0 0: 0 0 AAAATTTT AI 00000 2 chain 5 sites find / exp.num. .285 interval 1 TD 1 245 238 .28497 0 0: 0 0 AAAATTTT 2 2779 2772 .28497 0 0: 0 0 AAAATTTT 3 4892 4885 .28497 0 0: 0 0 AAAATTTT 4 6465 6458 .28497 0 0: 0 0 AAAATTCT 5 7175 7168 .28497 0 0: 0 0 AAAATTTT NM **** 124(22b).Signal of formiration 3'-end in mnRNA SQ gttyn-aaarryaga AI 00000 2 chain 2 sites find / exp.num. .196 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2304 2291 .19576 0 1: 0 1 GTTTCAAAAATATA 2 9243 9230 .19576 0 1: 0 1 GTTTCAAAAATATA NM **** 125(23b).Consensus mRNA cap site in Drosophila Cell 29,1027 (Gnomic) SQ yatcxgq CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 4.560 interval 8 TH num begin end exp.num. dist. mismatch site sequence TD 1 3514 3520 4.56006 0 0: 0 0 TATCAGG 2 3658 3664 4.56006 0 0: 0 0 TATCAGT AI 00000 2 chain 8 sites find / exp.num. 4.560 interval 8 TD 1 2802 2796 4.56006 0 0: 0 0 CATCAGT 2 2949 2943 4.56006 0 0: 0 0 TATCTGG 3 3783 3777 4.56006 0 0: 0 0 TATCAGG 4 4032 4026 4.56006 0 0: 0 0 CATCAGG 5 5004 4998 4.56006 0 0: 0 0 CATCAGT 6 6132 6126 4.56006 0 0: 0 0 CATCTGT 7 6441 6435 4.56006 0 0: 0 0 TATCAGT 8 6720 6714 4.56006 0 0: 0 0 TATCTGG NM **** 126(24b)."Cap box";one of a number of homology blocks at the 5'-ends SQ ycattcr CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1946 1952 2.28003 0 0: 0 0 TCATTCA 2 5789 5795 2.28003 0 0: 0 0 TCATTCA 3 8885 8891 2.28003 0 0: 0 0 TCATTCA NM **** 128(26b).Sequence present near the 3'-ends of yeast mitochondrial gen SQ aagaatat CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4773 4780 .14249 0 0: 0 0 AAGAATAT AI 00000 2 chain 2 sites find / exp.num. .142 interval 1 TD 1 757 750 .14249 0 0: 0 0 AAGAATAT 2 7687 7680 .14249 0 0: 0 0 AAGAATAT NM **** 129(27b).Consensus of a presumed transcription processing signal of m SQ ataatattctt CC max mismatch : 1 AI 00000 1 chain 3 sites find / exp.num. .076 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 747 757 .07567 0 1: 1 0 AAAATATTCTT 2 4349 4359 .07567 0 1: 1 0 ATAATATTTTT 3 7677 7687 .07567 0 1: 1 0 AAAATATTCTT AI 00000 2 chain 1 sites find / exp.num. .076 interval 1 TD 1 4783 4773 .07567 0 1: 1 0 AAAATATTCTT NM **** 130(28b).Site of splising of vertebrates 5'-end: PNAS (1984) V 81 N 2 SQ agguaagu CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1237 1244 .14249 0 0: 0 0 AGGTAAGT 2 8167 8174 .14249 0 0: 0 0 AGGTAAGT NM **** 131(29b).Site of splising of vertebrates 3'-end: PNAS (1984) V 81 N 2 SQ yyyyyncagg CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 3316 3325 1.13965 0 0: 0 0 TCTCTCCAGG 2 6539 6548 1.13965 0 0: 0 0 CTCTCCCAGG 3 6877 6886 1.13965 0 0: 0 0 TTTTCTCAGG NM **** 134(35b).Site of splising of plants 3'-end: NAR (1986) V 14 N 24 P 95 SQ tttkttkkkktgcagg AI 00000 2 chain 1 sites find / exp.num. .310 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3405 3390 .30974 0 2: 2 0 GTTGTTGTTATGGAGG NM **** 135(37b).Conservative blocks in selfsplising introns 1 group A: SQ augcuggaaa CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3621 3630 .27601 0 1: 1 0 ATGCTAGAAA NM **** 139(41b).Consensus sequence found in the same location in intervening SQ aaaatctt CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1110 1117 .14249 0 0: 0 0 AAAATCTT NM **** 19(5). SECOND MOTIF OF Ad5 E1a SQ zgcgxaa AI 00000 2 chain 2 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 230 224 2.28003 0 0: 0 0 GGCGAAA 2 7160 7154 2.28003 0 0: 0 0 GGCGAAA NM **** 23(19). EMBO J. v4 n10 p2669 H21.3.9 HSV-1/Herpesvirus samuiri SQ taatgarattc CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 643 653 .14244 0 1: 1 0 TTATGAGATTC 2 7573 7583 .14244 0 1: 1 0 TTATGAGATTC AI 00000 2 chain 1 sites find / exp.num. .142 interval 1 TD 1 4622 4612 .14244 0 1: 1 0 TAATGAAATCC NM **** 26(27). LVc MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ cctgc AI 00000 2 chain 2 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 2661 2657 9.12207 0 0: 0 0 CCTGC 2 5017 5013 9.12207 0 0: 0 0 CCTGC NM **** 28(34). INTERFERONE BETA ENHANCER (J.Mol Biol v204 n2 p221) SQ aaxanngaaaggr CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .267 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 887 899 .26702 0 1: 1 0 AATATTCAAAGGA 2 7817 7829 .26702 0 1: 1 0 AATATTCAAAGGA AI 00000 2 chain 3 sites find / exp.num. .267 interval 1 TD 1 2362 2350 .26702 0 1: 1 0 GAAAAAGAAAGGA 2 3550 3538 .26702 0 1: 1 0 AAAATAGAAAGTA 3 9301 9289 .26702 0 1: 1 0 GAAAAAGAAAGGA NM **** 31(48).Enchanser region of virus LPV SQ aagtctgcanagtctgca CC max mismatch : 4 AI 00000 1 chain 1 sites find / exp.num. .115 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3700 3717 .11533 0 4: 4 0 AAGTTTGTAAAGGATGCA NM **** 34(60).potential core sequence of enhancers of various human viruses SQ cxxxccac CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 902 909 1.13989 0 0: 0 0 CTTTCCAC 2 912 919 1.13989 0 0: 0 0 CAATCCAC 3 5946 5953 1.13989 0 0: 0 0 CATACCAC 4 6366 6373 1.13989 0 0: 0 0 CAAACCAC 5 7832 7839 1.13989 0 0: 0 0 CTTTCCAC 6 7842 7849 1.13989 0 0: 0 0 CAATCCAC NM **** 35(63).enhancer core SV40 SQ tGTGgxxx CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 1665 1672 1.13989 0 0: 0 0 TGTGGATA 2 3179 3186 1.13989 0 0: 0 0 TGTGGAAA 3 4556 4563 1.13989 0 0: 0 0 TGTGGATT 4 8604 8611 1.13989 0 0: 0 0 TGTGGATA AI 00000 2 chain 4 sites find / exp.num. 1.140 interval 3 TD 1 462 455 1.13989 0 0: 0 0 TGTGGTAA 2 6374 6367 1.13989 0 0: 0 0 TGTGGTTT 3 6480 6473 1.13989 0 0: 0 0 TGTGGTTT 4 7392 7385 1.13989 0 0: 0 0 TGTGGTAA NM **** 140(1). HIV REPEAT (Mol.Cel.Biol.,v7,n10,p3759 H21.3.9) SQ gggactttcc CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4835 4844 .27601 0 1: 1 0 GGGATTTTCC NM **** 145(8). SV40 ENHANCER CORE SQ tgtggxxxg AI 00000 2 chain 1 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 6374 6366 .28494 0 0: 0 0 TGTGGTTTG NM **** 156(22). Sph ELEMENT SV40 SQ raagyatgc AI 00000 2 chain 1 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3543 3535 .14247 0 0: 0 0 AAAGTATGC NM **** 158(26). LVb MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ caggata CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5607 5613 .57001 0 0: 0 0 CAGGATA NM **** 161(30). LYSOZYME SILENCER 1 (EMBO J v6 n8 p2298) SQ anCCTCCTCy CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .356 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 4045 4054 .35614 0 1: 1 0 TTCCTCCTCC NM **** 166(37).Consensus enchanser region of virus SV40 SQ rrtgtggxxx CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3177 3186 .28491 0 0: 0 0 AGTGTGGAAA AI 00000 2 chain 2 sites find / exp.num. .285 interval 1 TD 1 464 455 .28491 0 0: 0 0 AGTGTGGTAA 2 7394 7385 .28491 0 0: 0 0 AGTGTGGTAA NM **** 184(61).Putative enhancer core sequence of SV40 SQ ggagtggaaag AI 00000 2 chain 1 sites find / exp.num. .076 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 8034 8024 .07567 0 1: 1 0 GGAGAGGAAAG NM **** 186(64).Direct repeat in mielin proteolipid genes SQ gggaggagrrg AI 00000 2 chain 4 sites find / exp.num. .267 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1071 1061 .26708 0 1: 1 0 GGGAGGAGATG 2 1108 1098 .26708 0 1: 1 0 TGGAGGAGAGG 3 8001 7991 .26708 0 1: 1 0 GGGAGGAGATG 4 8038 8028 .26708 0 1: 1 0 TGGAGGAGAGG NM **** 36(10). NF1-FACtOR SQ tgg-gccaa AI 00000 2 chain 1 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2587 2574 .28477 6 0: 0 0 TGGagtacgGCCAA NM **** 39(26). NFY SQ ccaat CC max mismatch : 0 AI 00000 1 chain 7 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 49 53 9.12207 0 0: 0 0 CCAAT 2 348 352 9.12207 0 0: 0 0 CCAAT 3 2609 2613 9.12207 0 0: 0 0 CCAAT 4 3672 3676 9.12207 0 0: 0 0 CCAAT 5 6612 6616 9.12207 0 0: 0 0 CCAAT 6 6979 6983 9.12207 0 0: 0 0 CCAAT 7 7278 7282 9.12207 0 0: 0 0 CCAAT AI 00000 2 chain 10 sites find / exp.num. 9.122 interval 14 TD 1 118 114 9.12207 0 0: 0 0 CCAAT 2 3803 3799 9.12207 0 0: 0 0 CCAAT 3 4898 4894 9.12207 0 0: 0 0 CCAAT 4 5549 5545 9.12207 0 0: 0 0 CCAAT 5 5592 5588 9.12207 0 0: 0 0 CCAAT 6 6206 6202 9.12207 0 0: 0 0 CCAAT 7 6265 6261 9.12207 0 0: 0 0 CCAAT 8 6331 6327 9.12207 0 0: 0 0 CCAAT 9 6695 6691 9.12207 0 0: 0 0 CCAAT 10 7048 7044 9.12207 0 0: 0 0 CCAAT NM **** 40(2). CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 2.279 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 3389 3399 2.27905 0 0: 0 0 TCCTCCATAAC 2 6293 6303 2.27905 0 0: 0 0 TAGACCATGCC AI 00000 2 chain 4 sites find / exp.num. 2.279 interval 5 TD 1 1791 1781 2.27905 0 0: 0 0 TCGCCCATAGC 2 1798 1788 2.27905 0 0: 0 0 TCACCCATCGC 3 8730 8720 2.27905 0 0: 0 0 TCGCCCATAGC 4 8737 8727 2.27905 0 0: 0 0 TCACCCATCGC NM **** 187(2.) CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 2.279 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 3389 3399 2.27905 0 0: 0 0 TCCTCCATAAC 2 6293 6303 2.27905 0 0: 0 0 TAGACCATGCC AI 00000 2 chain 4 sites find / exp.num. 2.279 interval 5 TD 1 1791 1781 2.27905 0 0: 0 0 TCGCCCATAGC 2 1798 1788 2.27905 0 0: 0 0 TCACCCATCGC 3 8730 8720 2.27905 0 0: 0 0 TCGCCCATAGC 4 8737 8727 2.27905 0 0: 0 0 TCACCCATCGC NM **** 192(7). LARGE T PROTEIN OF PAPILLOMA VIRUS SQ xgrggc CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 9.121 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 3200 3205 9.12109 0 0: 0 0 AGAGGC 2 6845 6850 9.12109 0 0: 0 0 AGAGGC AI 00000 2 chain 2 sites find / exp.num. 9.121 interval 14 TD 1 5009 5004 9.12109 0 0: 0 0 AGAGGC 2 6758 6753 9.12109 0 0: 0 0 TGAGGC NM **** 193(8). RPG FACTOR SQ tgg-cca CC distance between two blocks of site: min = 7 max = 7 CC max mismatch in 1-st block: 0, in 2-nd block: 0 AI 00000 1 chain 2 sites find / exp.num. 2.279 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 2575 2587 2.27856 7 0: 0 0 TGGccgtactCCA 2 5629 5641 2.27856 7 0: 0 0 TGGaagaatcCCA AI 00000 2 chain 2 sites find / exp.num. 2.279 interval 5 TD 1 2587 2575 2.27856 7 0: 0 0 TGGagtacggCCA 2 5641 5629 2.27856 7 0: 0 0 TGGgattcttCCA NM **** 205(25). EMBO (1986) V 5 N 6 P 138 H 21.16 SQ tggmnnnnngccaa AI 00000 2 chain 1 sites find / exp.num. .071 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2587 2574 .07120 0 0: 0 0 TGGAGTACGGCCAA NM **** 207(28).Consensus sequence of several adenoviral promoters located at SQ gyrgytttc AI 00000 2 chain 1 sites find / exp.num. .285 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1128 1120 .28494 0 0: 0 0 GTGGCTTTC NM **** 209(30).Site of initiation of translation in genes of animals SQ zaannatgg AI 00000 2 chain 5 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 160 152 1.13977 0 0: 0 0 CAAATATGG 2 2104 2096 1.13977 0 0: 0 0 GAAAAATGG 3 7090 7082 1.13977 0 0: 0 0 CAAATATGG 4 7313 7305 1.13977 0 0: 0 0 CAATTATGG 5 9043 9035 1.13977 0 0: 0 0 GAAAAATGG NM **** 210(32).Optimal sequence for initiation of translation by eukaryotik SQ accatgg AI 00000 2 chain 2 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 2113 2107 .57001 0 0: 0 0 ACCATGG 2 9052 9046 .57001 0 0: 0 0 ACCATGG NM **** 41(5). HEAt-SHOSK RESPONSIVE ELEMENT SQ ttcnngaa CC max mismatch : 0 AI 00000 1 chain 5 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1631 1638 2.27979 0 0: 0 0 TTCAAGAA 2 4522 4529 2.27979 0 0: 0 0 TTCGAGAA 3 5509 5516 2.27979 0 0: 0 0 TTCATGAA 4 5957 5964 2.27979 0 0: 0 0 TTCAGGAA 5 8570 8577 2.27979 0 0: 0 0 TTCAAGAA AI 00000 2 chain 5 sites find / exp.num. 2.280 interval 5 TD 1 1638 1631 2.27979 0 0: 0 0 TTCTTGAA 2 4529 4522 2.27979 0 0: 0 0 TTCTCGAA 3 5516 5509 2.27979 0 0: 0 0 TTCATGAA 4 5964 5957 2.27979 0 0: 0 0 TTCCTGAA 5 8577 8570 2.27979 0 0: 0 0 TTCTTGAA NM **** 42(7). heat-shock HSP70 SQ ctcgaatgTTcgcgaaa CC max mismatch : 5 AI 00000 1 chain 2 sites find / exp.num. .464 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 9 25 .46350 0 5: 5 0 CCTGAATTTTCGCATAA 2 6939 6955 .46350 0 5: 5 0 CCTGAATTTTCGCATAA NM **** 44(10). HEAVY METALL RESPONSIVE ELEMENT SQ tgCrcyc AI 00000 2 chain 1 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 4216 4210 2.28003 0 0: 0 0 TGCGCTC NM **** 46(12). SRE ELEMENT OF HSP70 pnas v84 n8 p2203 H21.30 SQ aagggaaaag CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1573 1582 .27601 0 1: 1 0 AAGGAAAAAG 2 8512 8521 .27601 0 1: 1 0 AAGGAAAAAG AI 00000 2 chain 2 sites find / exp.num. .276 interval 1 TD 1 2366 2357 .27601 0 1: 1 0 AAGGGAAAAA 2 9305 9296 .27601 0 1: 1 0 AAGGGAAAAA NM **** 47(14). GLUCOCORTICOID RESPONSIVE ELEMENT SQ gnnjCj-tGttCt AI 00000 2 chain 1 sites find / exp.num. .240 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3205 3191 .24027 3 0: 0 0 GCCTCTcttTGTTCT NM **** 48(33).Consensus sequence of the recognition sites for the glucocorti SQ tgttct CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 1377 1382 2.28027 0 0: 0 0 TGTTCT 2 1443 1448 2.28027 0 0: 0 0 TGTTCT 3 8307 8312 2.28027 0 0: 0 0 TGTTCT 4 8373 8378 2.28027 0 0: 0 0 TGTTCT AI 00000 2 chain 3 sites find / exp.num. 2.280 interval 5 TD 1 3196 3191 2.28027 0 0: 0 0 TGTTCT 2 4156 4151 2.28027 0 0: 0 0 TGTTCT 3 6214 6209 2.28027 0 0: 0 0 TGTTCT NM **** 53(34).Consensus of putative activator sequence of immediate early SQ taatgarat AI 00000 2 chain 1 sites find / exp.num. .071 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4622 4614 .07124 0 0: 0 0 TAATGAAAT NM **** 222(20).1st site of induction by estrogens SQ agtcactgtgacc CC max mismatch : 2 AI 00000 1 chain 2 sites find / exp.num. .103 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2138 2150 .10319 0 2: 2 0 CATCACTGTGACC 2 9077 9089 .10319 0 2: 2 0 CATCACTGTGACC NM **** 223(21).2nd site of induction by estrogens SQ ggtcacagtgacc AI 00000 2 chain 2 sites find / exp.num. .103 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2150 2138 .10319 0 2: 2 0 GGTCACAGTGATG 2 9089 9077 .10319 0 2: 2 0 GGTCACAGTGATG NM **** 224(24).Site of induction J-strand of Ig genes M SQ tcatttgcac CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .276 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2559 2568 .27601 0 1: 1 0 CCATTTGCAC NM **** 233(2). MUSCUL-SPECIFIC FACTOR SQ axxtatncat CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1293 1302 .14246 0 0: 0 0 ATATATTCAT 2 1940 1949 .14246 0 0: 0 0 ATTTATTCAT 3 8223 8232 .14246 0 0: 0 0 ATATATTCAT 4 8879 8888 .14246 0 0: 0 0 ATTTATTCAT AI 00000 2 chain 2 sites find / exp.num. .142 interval 1 TD 1 1549 1540 .14246 0 0: 0 0 ATATATACAT 2 8488 8479 .14246 0 0: 0 0 ATATATACAT NM **** 235(4). CCCAC-BOX BINDING FACTOR SQ cccac CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 816 820 9.12207 0 0: 0 0 CCCAC 2 5929 5933 9.12207 0 0: 0 0 CCCAC 3 6015 6019 9.12207 0 0: 0 0 CCCAC 4 7746 7750 9.12207 0 0: 0 0 CCCAC AI 00000 2 chain 6 sites find / exp.num. 9.122 interval 14 TD 1 1468 1464 9.12207 0 0: 0 0 CCCAC 2 1477 1473 9.12207 0 0: 0 0 CCCAC 3 2859 2855 9.12207 0 0: 0 0 CCCAC 4 4979 4975 9.12207 0 0: 0 0 CCCAC 5 8398 8394 9.12207 0 0: 0 0 CCCAC 6 8407 8403 9.12207 0 0: 0 0 CCCAC NM **** 236(5). GG.Ar.CC BOX BINDING FACTOR SQ GGxxxxxxCC CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 804 813 .56982 0 0: 0 0 GGAATATTCC 2 7734 7743 .56982 0 0: 0 0 GGAATATTCC AI 00000 2 chain 2 sites find / exp.num. .570 interval 2 TD 1 813 804 .56982 0 0: 0 0 GGAATATTCC 2 7743 7734 .56982 0 0: 0 0 GGAATATTCC NM **** 242(11). ANTITROMBIN-III ENHANCER SPECIFIC FACTOR SQ gtGGxxxg AI 00000 2 chain 6 sites find / exp.num. 1.140 interval 3 TH num begin end exp.num. dist. mismatch site sequence TD 1 909 902 1.13989 0 0: 0 0 GTGGAAAG 2 919 912 1.13989 0 0: 0 0 GTGGATTG 3 5953 5946 1.13989 0 0: 0 0 GTGGTATG 4 6373 6366 1.13989 0 0: 0 0 GTGGTTTG 5 7839 7832 1.13989 0 0: 0 0 GTGGAAAG 6 7849 7842 1.13989 0 0: 0 0 GTGGATTG NM **** 246(15). NF-GMB PROTEIN FOR CYTOKIN 2 SPECIFIC SEQUENCE SQ tyaggrta CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5606 5613 .56995 0 0: 0 0 TCAGGATA NM **** 247(16). IMMUNOGLOBIN SPECIFIC ELEMENT (pd) SQ tgcactgtgnccag CC max mismatch : 2 AI 00000 1 chain 2 sites find / exp.num. .103 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2139 2152 .10318 0 2: 2 0 ATCACTGTGACCAG 2 9078 9091 .10318 0 2: 2 0 ATCACTGTGACCAG NM **** 252(21). RIBOSOMAL PROTEIN SPECIFIC MOTIF (JBC v263 n33 p17772) SQ cttccg AI 00000 2 chain 1 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 5047 5042 2.28027 0 0: 0 0 CTTCCG NM **** 253(22).cycle histone MCB 85 5 2 380 389 SQ GAYTTC CC max mismatch : 0 AI 00000 1 chain 8 sites find / exp.num. 4.561 interval 8 TH num begin end exp.num. dist. mismatch site sequence TD 1 118 123 4.56055 0 0: 0 0 GACTTC 2 187 192 4.56055 0 0: 0 0 GATTTC 3 1396 1401 4.56055 0 0: 0 0 GACTTC 4 4613 4618 4.56055 0 0: 0 0 GATTTC 5 5850 5855 4.56055 0 0: 0 0 GATTTC 6 6189 6194 4.56055 0 0: 0 0 GACTTC 7 7048 7053 4.56055 0 0: 0 0 GACTTC 8 7117 7122 4.56055 0 0: 0 0 GATTTC AI 00000 2 chain 4 sites find / exp.num. 4.561 interval 8 TD 1 152 147 4.56055 0 0: 0 0 GATTTC 2 3735 3730 4.56055 0 0: 0 0 GATTTC 3 6569 6564 4.56055 0 0: 0 0 GATTTC 4 7082 7077 4.56055 0 0: 0 0 GATTTC NM **** 254(23). cycle cell 86 45 4 537 544 trt1 SQ GCGAAA AI 00000 2 chain 4 sites find / exp.num. 2.280 interval 5 TH num begin end exp.num. dist. mismatch site sequence TD 1 21 16 2.28027 0 0: 0 0 GCGAAA 2 229 224 2.28027 0 0: 0 0 GCGAAA 3 6951 6946 2.28027 0 0: 0 0 GCGAAA 4 7159 7154 2.28027 0 0: 0 0 GCGAAA NM **** 255(24). cycle cell 86 45 4 537 544 yeast histone cdc9 SQ cacgaaaa CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .142 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4871 4878 .14249 0 0: 0 0 CACGAAAA NM **** 258(27).Regulating element of promotor of contractive(KONTRAKTILNIY) SQ cattcct CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .570 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 4412 4418 .57001 0 0: 0 0 CATTCCT NM **** 263(32).Sequence repeated 5 times in the promoter of the mouse SQ gaaga CC max mismatch : 0 AI 00000 1 chain 31 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 209 213 9.12207 0 0: 0 0 GAAGA 2 783 787 9.12207 0 0: 0 0 GAAGA 3 799 803 9.12207 0 0: 0 0 GAAGA 4 1314 1318 9.12207 0 0: 0 0 GAAGA 5 1497 1501 9.12207 0 0: 0 0 GAAGA 6 1565 1569 9.12207 0 0: 0 0 GAAGA 7 1901 1905 9.12207 0 0: 0 0 GAAGA 8 2880 2884 9.12207 0 0: 0 0 GAAGA 9 3030 3034 9.12207 0 0: 0 0 GAAGA 10 3230 3234 9.12207 0 0: 0 0 GAAGA 11 3771 3775 9.12207 0 0: 0 0 GAAGA 12 4161 4165 9.12207 0 0: 0 0 GAAGA 13 5166 5170 9.12207 0 0: 0 0 GAAGA 14 5584 5588 9.12207 0 0: 0 0 GAAGA 15 5631 5635 9.12207 0 0: 0 0 GAAGA 16 5675 5679 9.12207 0 0: 0 0 GAAGA 17 6162 6166 9.12207 0 0: 0 0 GAAGA 18 6207 6211 9.12207 0 0: 0 0 GAAGA 19 6425 6429 9.12207 0 0: 0 0 GAAGA 20 6696 6700 9.12207 0 0: 0 0 GAAGA 21 6729 6733 9.12207 0 0: 0 0 GAAGA 22 6822 6826 9.12207 0 0: 0 0 GAAGA 23 6825 6829 9.12207 0 0: 0 0 GAAGA 24 6924 6928 9.12207 0 0: 0 0 GAAGA 25 7139 7143 9.12207 0 0: 0 0 GAAGA 26 7713 7717 9.12207 0 0: 0 0 GAAGA 27 7729 7733 9.12207 0 0: 0 0 GAAGA 28 8244 8248 9.12207 0 0: 0 0 GAAGA 29 8427 8431 9.12207 0 0: 0 0 GAAGA 30 8504 8508 9.12207 0 0: 0 0 GAAGA 31 8840 8844 9.12207 0 0: 0 0 GAAGA AI 00000 2 chain 19 sites find / exp.num. 9.122 interval 14 TD 1 61 57 9.12207 0 0: 0 0 GAAGA 2 718 714 9.12207 0 0: 0 0 GAAGA 3 758 754 9.12207 0 0: 0 0 GAAGA 4 1097 1093 9.12207 0 0: 0 0 GAAGA 5 1885 1881 9.12207 0 0: 0 0 GAAGA 6 2341 2337 9.12207 0 0: 0 0 GAAGA 7 3133 3129 9.12207 0 0: 0 0 GAAGA 8 3861 3857 9.12207 0 0: 0 0 GAAGA 9 3911 3907 9.12207 0 0: 0 0 GAAGA 10 4047 4043 9.12207 0 0: 0 0 GAAGA 11 4311 4307 9.12207 0 0: 0 0 GAAGA 12 5132 5128 9.12207 0 0: 0 0 GAAGA 13 5375 5371 9.12207 0 0: 0 0 GAAGA 14 5442 5438 9.12207 0 0: 0 0 GAAGA 15 6991 6987 9.12207 0 0: 0 0 GAAGA 16 7648 7644 9.12207 0 0: 0 0 GAAGA 17 7688 7684 9.12207 0 0: 0 0 GAAGA 18 8824 8820 9.12207 0 0: 0 0 GAAGA 19 9280 9276 9.12207 0 0: 0 0 GAAGA NM **** 268(37).Consensus sequence of repeated hexanucleotides within the 5'- SQ aarqga CC max mismatch : 0 AI 00000 1 chain 21 sites find / exp.num. 9.121 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 106 111 9.12109 0 0: 0 0 AAATGA 2 466 471 9.12109 0 0: 0 0 AAAGGA 3 544 549 9.12109 0 0: 0 0 AAATGA 4 894 899 9.12109 0 0: 0 0 AAAGGA 5 1572 1577 9.12109 0 0: 0 0 AAAGGA 6 1580 1585 9.12109 0 0: 0 0 AAGGGA 7 2519 2524 9.12109 0 0: 0 0 AAATGA 8 2721 2726 9.12109 0 0: 0 0 AAGGGA 9 3708 3713 9.12109 0 0: 0 0 AAAGGA 10 4130 4135 9.12109 0 0: 0 0 AAGTGA 11 4833 4838 9.12109 0 0: 0 0 AAGGGA 12 5471 5476 9.12109 0 0: 0 0 AAGTGA 13 5963 5968 9.12109 0 0: 0 0 AAAGGA 14 6394 6399 9.12109 0 0: 0 0 AAAGGA 15 6504 6509 9.12109 0 0: 0 0 AAGGGA 16 7036 7041 9.12109 0 0: 0 0 AAATGA 17 7396 7401 9.12109 0 0: 0 0 AAAGGA 18 7474 7479 9.12109 0 0: 0 0 AAATGA 19 7824 7829 9.12109 0 0: 0 0 AAAGGA 20 8511 8516 9.12109 0 0: 0 0 AAAGGA 21 8519 8524 9.12109 0 0: 0 0 AAGGGA AI 00000 2 chain 27 sites find / exp.num. 9.121 interval 14 TD 1 225 220 9.12109 0 0: 0 0 AAATGA 2 280 275 9.12109 0 0: 0 0 AAATGA 3 296 291 9.12109 0 0: 0 0 AAGGGA 4 614 609 9.12109 0 0: 0 0 AAATGA 5 742 737 9.12109 0 0: 0 0 AAATGA 6 829 824 9.12109 0 0: 0 0 AAATGA 7 2355 2350 9.12109 0 0: 0 0 AAAGGA 8 2366 2361 9.12109 0 0: 0 0 AAGGGA 9 2482 2477 9.12109 0 0: 0 0 AAGGGA 10 2740 2735 9.12109 0 0: 0 0 AAAGGA 11 2828 2823 9.12109 0 0: 0 0 AAAGGA 12 3002 2997 9.12109 0 0: 0 0 AAGGGA 13 3599 3594 9.12109 0 0: 0 0 AAATGA 14 3883 3878 9.12109 0 0: 0 0 AAATGA 15 4609 4604 9.12109 0 0: 0 0 AAGTGA 16 5355 5350 9.12109 0 0: 0 0 AAATGA 17 6277 6272 9.12109 0 0: 0 0 AAAGGA 18 6343 6338 9.12109 0 0: 0 0 AAATGA 19 7104 7099 9.12109 0 0: 0 0 AAGGGA 20 7155 7150 9.12109 0 0: 0 0 AAATGA 21 7210 7205 9.12109 0 0: 0 0 AAATGA 22 7226 7221 9.12109 0 0: 0 0 AAGGGA 23 7544 7539 9.12109 0 0: 0 0 AAATGA 24 7672 7667 9.12109 0 0: 0 0 AAATGA 25 7759 7754 9.12109 0 0: 0 0 AAATGA 26 9294 9289 9.12109 0 0: 0 0 AAAGGA 27 9305 9300 9.12109 0 0: 0 0 AAGGGA NM **** 271(41).Sequence frequently found in the promoter region of histone H SQ cgcac AI 00000 2 chain 1 sites find / exp.num. 9.122 interval 14 TH num begin end exp.num. dist. mismatch site sequence TD 1 2515 2511 9.12207 0 0: 0 0 CGCAC