ID HSTNL22 DE Human transposon L1.2. NM **** 1.(1) POLIMERASE II SQ tATAaa CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2032 2037 1.47583 0 0: 0 0 TATAAA 2 3745 3750 1.47583 0 0: 0 0 TATAAA 3 5540 5545 1.47583 0 0: 0 0 TATAAA 4 5555 5560 1.47583 0 0: 0 0 TATAAA AI 00000 2 chain 2 sites find / exp.num. 1.476 interval 4 TD 1 1804 1799 1.47583 0 0: 0 0 TATAAA 2 2890 2885 1.47583 0 0: 0 0 TATAAA NM **** 2.(1.1) Inr (ripl.POLIMERASE II) SQ NTCAQTY CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 5.902 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 3511 3517 5.90234 0 0: 0 0 CTCATTT 2 3530 3536 5.90234 0 0: 0 0 ATCATTC 3 5747 5753 5.90234 0 0: 0 0 ATCATTC AI 00000 2 chain 13 sites find / exp.num. 5.902 interval 10 TD 1 1024 1018 5.90234 0 0: 0 0 ATCATTC 2 1287 1281 5.90234 0 0: 0 0 TTCATTT 3 1291 1285 5.90234 0 0: 0 0 TTCATTC 4 1296 1290 5.90234 0 0: 0 0 TTCATTT 5 1339 1333 5.90234 0 0: 0 0 CTCATTT 6 1590 1584 5.90234 0 0: 0 0 TTCATTT 7 2748 2742 5.90234 0 0: 0 0 TTCAGTT 8 2767 2761 5.90234 0 0: 0 0 GTCATTC 9 2790 2784 5.90234 0 0: 0 0 TTCATTT 10 3033 3027 5.90234 0 0: 0 0 TTCAGTT 11 3178 3172 5.90234 0 0: 0 0 ATCATTT 12 5539 5533 5.90234 0 0: 0 0 CTCATTT 13 5704 5698 5.90234 0 0: 0 0 ATCATTT NM **** 4.(9a) n=55;found upstream from the promoter of the pheasant conalbu- SQ ggaaa CC max mismatch : 0 AI 00000 1 chain 23 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 263 267 5.90430 0 0: 0 0 GGAAA 2 821 825 5.90430 0 0: 0 0 GGAAA 3 915 919 5.90430 0 0: 0 0 GGAAA 4 938 942 5.90430 0 0: 0 0 GGAAA 5 1432 1436 5.90430 0 0: 0 0 GGAAA 6 1504 1508 5.90430 0 0: 0 0 GGAAA 7 1591 1595 5.90430 0 0: 0 0 GGAAA 8 1640 1644 5.90430 0 0: 0 0 GGAAA 9 1879 1883 5.90430 0 0: 0 0 GGAAA 10 2116 2120 5.90430 0 0: 0 0 GGAAA 11 2189 2193 5.90430 0 0: 0 0 GGAAA 12 2739 2743 5.90430 0 0: 0 0 GGAAA 13 2880 2884 5.90430 0 0: 0 0 GGAAA 14 2917 2921 5.90430 0 0: 0 0 GGAAA 15 3034 3038 5.90430 0 0: 0 0 GGAAA 16 4039 4043 5.90430 0 0: 0 0 GGAAA 17 4061 4065 5.90430 0 0: 0 0 GGAAA 18 4360 4364 5.90430 0 0: 0 0 GGAAA 19 4510 4514 5.90430 0 0: 0 0 GGAAA 20 4769 4773 5.90430 0 0: 0 0 GGAAA 21 4801 4805 5.90430 0 0: 0 0 GGAAA 22 5366 5370 5.90430 0 0: 0 0 GGAAA 23 5740 5744 5.90430 0 0: 0 0 GGAAA AI 00000 2 chain 1 sites find / exp.num. 5.904 interval 10 TD 1 91 87 5.90430 0 0: 0 0 GGAAA NM **** 6.(5) POLY A SINGLE BLOCK SQ AATAAA CC max mismatch : 0 AI 00000 1 chain 15 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1324 1329 1.47583 0 0: 0 0 AATAAA 2 1789 1794 1.47583 0 0: 0 0 AATAAA 3 2155 2160 1.47583 0 0: 0 0 AATAAA 4 2797 2802 1.47583 0 0: 0 0 AATAAA 5 3130 3135 1.47583 0 0: 0 0 AATAAA 6 3166 3171 1.47583 0 0: 0 0 AATAAA 7 3251 3256 1.47583 0 0: 0 0 AATAAA 8 3620 3625 1.47583 0 0: 0 0 AATAAA 9 3727 3732 1.47583 0 0: 0 0 AATAAA 10 3842 3847 1.47583 0 0: 0 0 AATAAA 11 4042 4047 1.47583 0 0: 0 0 AATAAA 12 4285 4290 1.47583 0 0: 0 0 AATAAA 13 4363 4368 1.47583 0 0: 0 0 AATAAA 14 4787 4792 1.47583 0 0: 0 0 AATAAA 15 6021 6026 1.47583 0 0: 0 0 AATAAA AI 00000 2 chain 1 sites find / exp.num. 1.476 interval 4 TD 1 5584 5579 1.47583 0 0: 0 0 AATAAA NM **** 8.(14b) One of two related variants of a presumed transcription termi SQ tatgt CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 1364 1368 5.90430 0 0: 0 0 TATGT 2 4818 4822 5.90430 0 0: 0 0 TATGT 3 5575 5579 5.90430 0 0: 0 0 TATGT 4 5971 5975 5.90430 0 0: 0 0 TATGT AI 00000 2 chain 12 sites find / exp.num. 5.904 interval 10 TD 1 1561 1557 5.90430 0 0: 0 0 TATGT 2 2014 2010 5.90430 0 0: 0 0 TATGT 3 2147 2143 5.90430 0 0: 0 0 TATGT 4 2284 2280 5.90430 0 0: 0 0 TATGT 5 2611 2607 5.90430 0 0: 0 0 TATGT 6 2780 2776 5.90430 0 0: 0 0 TATGT 7 2841 2837 5.90430 0 0: 0 0 TATGT 8 3297 3293 5.90430 0 0: 0 0 TATGT 9 4000 3996 5.90430 0 0: 0 0 TATGT 10 4954 4950 5.90430 0 0: 0 0 TATGT 11 5668 5664 5.90430 0 0: 0 0 TATGT 12 5972 5968 5.90430 0 0: 0 0 TATGT NM **** 9.(9) PRIMER REVERSE TRANSCRIPTION SQ TGGngzntygncygggax CC max mismatch : 3 AI 00000 1 chain 1 sites find / exp.num. .274 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5462 5479 .27428 0 3: 3 0 TGGCGATTCCTCAGGGAT AI 00000 2 chain 1 sites find / exp.num. .338 interval 1 TD 1 4489 4472 .33811 0 3: 3 0 TGGTAGCTTGATGGGGAT NM **** 11.(14) AD ORI SQ ataatatacc CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .179 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2557 2566 .17860 0 1: 1 0 AGAATATACC 2 4286 4295 .17860 0 1: 1 0 ATAAAATACC NM **** 13.(19) ARS Y XE DM SQ xtttatrtttx AI 00000 2 chain 4 sites find / exp.num. .323 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2038 2028 .01152 0 0: 0 0 ATTTATATTTA 2 2201 2191 .32257 0 1: 1 0 TTTTTTGTTTT 3 4907 4897 .32257 0 1: 1 0 TTTTAGGTTTA 4 4915 4905 .32257 0 1: 1 0 TTTTATGGTTT NM **** 14.(24) ARS yeast, xenopus SQ xttttatrtttx AI 00000 2 chain 2 sites find / exp.num. .089 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2202 2191 .08927 0 1: 1 0 TTTTTTTGTTTT 2 4916 4905 .08927 0 1: 1 0 TTTTTATGGTTT NM **** 15.(22) SAR A BOX OF DROSOFILA j mol biol v198 n 4 p677 &cell v46 n4 SQ aataaayaaa CC max mismatch : 1 AI 00000 1 chain 5 sites find / exp.num. .334 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3007 3016 .33415 0 1: 1 0 AATAACTAAA 2 3130 3139 .33415 0 1: 1 0 AATAAAGAAA 3 3723 3732 .33415 0 1: 1 0 AATCAATAAA 4 5178 5187 .33415 0 1: 1 0 AAAAAACAAA 5 6021 6030 .33415 0 1: 1 0 AATAAAAAAA AI 00000 2 chain 1 sites find / exp.num. .334 interval 1 TD 1 5584 5575 .33415 0 1: 1 0 AATAAACATA NM **** 16.(23) SAR T BOX OF DROSOFILA cell v46 n4 p521 SQ TtXTxTTXtt AI 00000 2 chain 19 sites find / exp.num. .046 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 6030 6021 .04609 0 0: 0 0 TTTTTTTATT 2 6033 6024 .04609 0 0: 0 0 TTTTTTTTTT 3 6034 6025 .04609 0 0: 0 0 TTTTTTTTTT 4 6035 6026 .04609 0 0: 0 0 TTTTTTTTTT 5 6036 6027 .04609 0 0: 0 0 TTTTTTTTTT 6 6037 6028 .04609 0 0: 0 0 TTTTTTTTTT 7 6038 6029 .04609 0 0: 0 0 TTTTTTTTTT 8 6039 6030 .04609 0 0: 0 0 TTTTTTTTTT 9 6040 6031 .04609 0 0: 0 0 TTTTTTTTTT 10 6041 6032 .04609 0 0: 0 0 TTTTTTTTTT 11 6042 6033 .04609 0 0: 0 0 TTTTTTTTTT 12 6043 6034 .04609 0 0: 0 0 TTTTTTTTTT 13 6044 6035 .04609 0 0: 0 0 TTTTTTTTTT 14 6045 6036 .04609 0 0: 0 0 TTTTTTTTTT 15 6046 6037 .04609 0 0: 0 0 TTTTTTTTTT 16 6047 6038 .04609 0 0: 0 0 TTTTTTTTTT 17 6048 6039 .04609 0 0: 0 0 TTTTTTTTTT 18 6049 6040 .04609 0 0: 0 0 TTTTTTTTTT 19 6050 6041 .04609 0 0: 0 0 TTTTTTTTTT NM **** 17(30). initiation of translation in genes of animals SQ zaannatgg CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .738 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 906 914 .73755 0 0: 0 0 CAAAGATGG 2 1352 1360 .73755 0 0: 0 0 GAAATATGG AT 00000 2 chain 1 sites find / exp.num. .738 interval 2 TD 1 5753 5745 .73755 0 0: 0 0 GAATGATGG NM **** 18(32).optimal sequence for initiation of translation by eukaryotik SQ accatgg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5672 5678 .36890 0 0: 0 0 ACCATGG NM **** 60(11). INTRON-EXON JUNCTION SQ yyyyynyAGG CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 1.475 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 534 543 1.47485 0 0: 0 0 CCTCTGTAGG 2 5715 5724 1.47485 0 0: 0 0 CCTTTGTAGG AI 00000 2 chain 6 sites find / exp.num. 1.475 interval 4 TD 1 1855 1846 1.47485 0 0: 0 0 CTCTTTTAGG 2 1867 1858 1.47485 0 0: 0 0 TTCCTTCAGG 3 2392 2383 1.47485 0 0: 0 0 TCTTTGTAGG 4 2910 2901 1.47485 0 0: 0 0 CTCTTGTAGG 5 4757 4748 1.47485 0 0: 0 0 TTTTCTCAGG 6 4927 4918 1.47485 0 0: 0 0 TTCTTCTAGG NM **** 63(16). MT ORI SQ tatgtcytr AI 00000 2 chain 1 sites find / exp.num. .092 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4954 4946 .09219 0 0: 0 0 TATGTCCTG NM **** 68(27).ARS of chloroplasts SQ anrtnaccaagt CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .334 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1419 1430 .33404 0 1: 1 0 ATGGAACCAAGT NM **** 69(28).ARS of human SQ tattyytaaatttagtxt AI 00000 2 chain 1 sites find / exp.num. .117 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2035 2018 .01151 0 3: 3 0 TATATTTAAAGTTAATAT NM **** 70(29).conservative sequence of ORI of adenovirus (AD) SQ cxnymtmxataatataccyyay CC max mismatch : 5 AI 00000 1 chain 3 sites find / exp.num. .418 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 1782 1803 .41816 0 5: 5 0 AAGGAGAAATAAAATACTTTAT 2 2549 2570 .41816 0 5: 5 0 AAATCAACAGAATATACCTTTT 3 4104 4125 .41816 0 5: 5 0 TTGTATATCTAGAAAACCCCAT NM **** 71(31).sequence repeated nontandemly several times in the origin of t SQ gcctc CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 191 195 5.90430 0 0: 0 0 GCCTC 2 533 537 5.90430 0 0: 0 0 GCCTC 3 686 690 5.90430 0 0: 0 0 GCCTC 4 959 963 5.90430 0 0: 0 0 GCCTC 5 1227 1231 5.90430 0 0: 0 0 GCCTC 6 1344 1348 5.90430 0 0: 0 0 GCCTC AI 00000 2 chain 6 sites find / exp.num. 5.904 interval 10 TD 1 187 183 5.90430 0 0: 0 0 GCCTC 2 430 426 5.90430 0 0: 0 0 GCCTC 3 526 522 5.90430 0 0: 0 0 GCCTC 4 739 735 5.90430 0 0: 0 0 GCCTC 5 3525 3521 5.90430 0 0: 0 0 GCCTC 6 4597 4593 5.90430 0 0: 0 0 GCCTC NM **** 72(33).consensus sequence of the cores of autonomously replicating SQ xaaayataaax CC max mismatch : 1 AI 00000 1 chain 4 sites find / exp.num. .323 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2028 2038 .01152 0 0: 0 0 TAAATATAAAT 2 2191 2201 .32257 0 1: 1 0 AAAACAAAAAA 3 4897 4907 .32257 0 1: 1 0 TAAACCTAAAA 4 4905 4915 .32257 0 1: 1 0 AAACCATAAAA NM **** 74(2a).Promotor of RNA polymerase 1 (mouse, rat) SQ atcttt-tattg AI 00000 2 chain 1 sites find / exp.num. .109 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1734 1707 .10913 17 1: 1 0 TTCTTTtctttaagaatgttgaaTATTG NM **** 75(3a).Promotor of RNA polymerase 1 (human) SQ atcttt-ttttgg AI 00000 2 chain 2 sites find / exp.num. .034 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 2626 2595 .03408 20 1: 1 0 AGCTTTacttccaactatgtggtcaaTTTTGG 2 5008 4977 .03408 20 1: 1 0 GTCTTTtgttgccattgcttttggtgTTTTGG NM **** 76(4a).sequence common for transcription initiation sites of rRNA gen SQ trctgacacgctgtcctyt AI 00000 2 chain 1 sites find / exp.num. .190 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1270 1252 .18965 0 5: 5 0 TGCTGATACCCTTTCTTCC NM **** 80(11a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ gggttg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2208 2213 1.47583 0 0: 0 0 GGGTTG AI 00000 2 chain 4 sites find / exp.num. 1.476 interval 4 TD 1 1744 1739 1.47583 0 0: 0 0 GGGTTG 2 3823 3818 1.47583 0 0: 0 0 GGGTTG 3 5193 5188 1.47583 0 0: 0 0 GGGTTG 4 5623 5618 1.47583 0 0: 0 0 GGGTTG NM **** 82(13a).consensus sequence near the 3'-ends of the adenovirus 2 genes SQ ttgggg AI 00000 2 chain 2 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1473 1468 1.47583 0 0: 0 0 TTGGGG 2 2550 2545 1.47583 0 0: 0 0 TTGGGG NM **** 85(16a).one of two suggested consensus sequences for RNA-polymerase I SQ ggttgg AI 00000 2 chain 2 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 3391 3386 1.47583 0 0: 0 0 GGTTGG 2 5622 5617 1.47583 0 0: 0 0 GGTTGG NM **** 97(28a).consensus sequence of human mitochondrial promoters SQ canaccccaaagaya CC max mismatch : 3 AI 00000 1 chain 3 sites find / exp.num. .414 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 899 913 .41401 0 3: 3 0 AAAACCACAAAGATG 2 1516 1530 .41401 0 3: 3 0 AACGCCACAAAGATA 3 2514 2528 .41401 0 3: 3 0 CAGACCTAATAGACA NM **** 98(29a).sequence within the promoter of the human mitochondrial gene SQ cccacacccctgtc AI 00000 2 chain 2 sites find / exp.num. .240 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 254 241 .24041 0 3: 3 0 CCGTCACCCCTTTC 2 4962 4949 .24041 0 3: 3 0 CCCACGCCTATGTC NM **** 99(31a).putative regulatory sequence(promoter element) present in SQ gggnggrr CC max mismatch : 0 AI 00000 1 chain 7 sites find / exp.num. 1.475 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1 8 1.47534 0 0: 0 0 GGGGGGAG 2 4 11 1.47534 0 0: 0 0 GGGAGGAG 3 434 441 1.47534 0 0: 0 0 GGGAGGGG 4 498 505 1.47534 0 0: 0 0 GGGTGGAG 5 5882 5889 1.47534 0 0: 0 0 GGGAGGGG 6 5886 5893 1.47534 0 0: 0 0 GGGGGGAG 7 5889 5896 1.47534 0 0: 0 0 GGGAGGGA AI 00000 2 chain 2 sites find / exp.num. 1.475 interval 4 TD 1 285 278 1.47534 0 0: 0 0 GGGTGGGA 2 2547 2540 1.47534 0 0: 0 0 GGGTGGAG NM **** 101(33a)."Goldberg-Hogness box";consensus sequence belonging to eukar SQ tataxax CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2032 2038 1.47559 0 0: 0 0 TATAAAT 2 5540 5546 1.47559 0 0: 0 0 TATAAAT AI 00000 2 chain 1 sites find / exp.num. 1.476 interval 4 TD 1 2890 2884 1.47559 0 0: 0 0 TATAAAT NM **** 103(36a).consensus sequence of a tentative transcription initiation SQ aagtta AI 00000 2 chain 1 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2027 2022 1.47583 0 0: 0 0 AAGTTA NM **** 104(37a).sequence frequently found in the promoter region of histone SQ ccgca CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 4552 4556 5.90430 0 0: 0 0 CCGCA 2 4715 4719 5.90430 0 0: 0 0 CCGCA 3 5788 5792 5.90430 0 0: 0 0 CCGCA AI 00000 2 chain 2 sites find / exp.num. 5.904 interval 10 TD 1 5394 5390 5.90430 0 0: 0 0 CCGCA 2 5588 5584 5.90430 0 0: 0 0 CCGCA NM **** 119(13b).One of two related variants of a presumed transcription term SQ tagtggtggtgggct AI 00000 2 chain 1 sites find / exp.num. .075 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 518 504 .07463 0 3: 3 0 GAGCTGTGGTGGGCT NM **** 121(16b).Consensus of a presumed polyadenylation signal in Trypanosom SQ aaaattyt CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .184 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5102 5109 .18442 0 0: 0 0 AAAATTTT AI 00000 2 chain 3 sites find / exp.num. .184 interval 1 TD 1 1738 1731 .18442 0 0: 0 0 AAAATTCT 2 3580 3573 .18442 0 0: 0 0 AAAATTCT 3 5109 5102 .18442 0 0: 0 0 AAAATTTT NM **** 125(23b).Consensus mRNA cap site in Drosophila Cell 29,1027 (Gnomic) SQ yatcxgq CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 2.951 interval 6 TH num begin end exp.num. dist. mismatch site sequence TD 1 861 867 2.95117 0 0: 0 0 CATCTGT 2 2097 2103 2.95117 0 0: 0 0 CATCAGT AI 00000 2 chain 1 sites find / exp.num. 2.951 interval 6 TD 1 3413 3407 2.95117 0 0: 0 0 CATCTGG NM **** 126(24b)."Cap box";one of a number of homology blocks at the 5'-ends SQ ycattcr CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 4262 4268 1.47559 0 0: 0 0 CCATTCG 2 4941 4947 1.47559 0 0: 0 0 CCATTCA AI 00000 2 chain 3 sites find / exp.num. 1.476 interval 4 TD 1 1290 1284 1.47559 0 0: 0 0 TCATTCA 2 2766 2760 1.47559 0 0: 0 0 TCATTCA 3 3924 3918 1.47559 0 0: 0 0 CCATTCA NM **** 131(29b).Site of splising of vertebrates 3'-end: PNAS (1984) V 81 N 2 SQ yyyyyncagg AI 00000 2 chain 2 sites find / exp.num. .737 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 1867 1858 .73743 0 0: 0 0 TTCCTTCAGG 2 4757 4748 .73743 0 0: 0 0 TTTTCTCAGG NM **** 134(35b).Site of splising of plants 3'-end: NAR (1986) V 14 N 24 P 95 SQ tttkttkkkktgcagg AI 00000 2 chain 2 sites find / exp.num. .200 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1007 992 .20035 0 2: 2 0 TTTGTTCTGTTGCTGG 2 3754 3739 .20035 0 2: 2 0 TCTGTTTATATGCTGG NM **** 137(39b).Conservative blocks in selfsplising introns 1 group box 9L: SQ tcagagactaca CC max mismatch : 2 AI 00000 1 chain 1 sites find / exp.num. .227 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3222 3233 .22713 0 2: 2 0 TCAGAGAATACT AI 00000 2 chain 1 sites find / exp.num. .227 interval 1 TD 1 2229 2218 .22713 0 2: 2 0 TCAGAGACTAGG NM **** 20(7). DECAMER FROM IMMUNOGLOBULIN GENES SQ AtGCAAAtna CC max mismatch : 1 AI 00000 1 chain 3 sites find / exp.num. .230 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 3246 3255 .23045 0 1: 1 0 ACGCAAATAA 2 3718 3727 .23045 0 1: 1 0 ACGCAAATCA 3 5300 5309 .02304 0 0: 0 0 ATGCAAATCA NM **** 25(25). LVa MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ gaacag CC max mismatch : 0 AI 00000 1 chain 7 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 29 34 1.47583 0 0: 0 0 GAACAG 2 925 930 1.47583 0 0: 0 0 GAACAG 3 2646 2651 1.47583 0 0: 0 0 GAACAG 4 4687 4692 1.47583 0 0: 0 0 GAACAG 5 4692 4697 1.47583 0 0: 0 0 GAACAG 6 5077 5082 1.47583 0 0: 0 0 GAACAG 7 5218 5223 1.47583 0 0: 0 0 GAACAG NM **** 26(27). LVc MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ cctgc CC max mismatch : 0 AI 00000 1 chain 6 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 526 530 5.90430 0 0: 0 0 CCTGC 2 530 534 5.90430 0 0: 0 0 CCTGC 3 792 796 5.90430 0 0: 0 0 CCTGC 4 1841 1845 5.90430 0 0: 0 0 CCTGC 5 2752 2756 5.90430 0 0: 0 0 CCTGC 6 5982 5986 5.90430 0 0: 0 0 CCTGC AI 00000 2 chain 10 sites find / exp.num. 5.904 interval 10 TD 1 143 139 5.90430 0 0: 0 0 CCTGC 2 180 176 5.90430 0 0: 0 0 CCTGC 3 562 558 5.90430 0 0: 0 0 CCTGC 4 752 748 5.90430 0 0: 0 0 CCTGC 5 778 774 5.90430 0 0: 0 0 CCTGC 6 1448 1444 5.90430 0 0: 0 0 CCTGC 7 1487 1483 5.90430 0 0: 0 0 CCTGC 8 2208 2204 5.90430 0 0: 0 0 CCTGC 9 2918 2914 5.90430 0 0: 0 0 CCTGC 10 4034 4030 5.90430 0 0: 0 0 CCTGC NM **** 28(34). INTERFERONE BETA ENHANCER (J.Mol Biol v204 n2 p221) SQ aaxanngaaaggr CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .173 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1874 1886 .17275 0 1: 1 0 AACATGGAAAGGA 2 4764 4776 .17275 0 1: 1 0 AATGGGGAAAGGA NM **** 29(42).Enchanser region of virus PV SQ gctgtgqttttgca CC max mismatch : 3 AI 00000 1 chain 1 sites find / exp.num. .414 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 3081 3094 .41408 0 3: 3 0 GCTGGTTTTTTGAA AI 00000 2 chain 2 sites find / exp.num. .414 interval 2 TD 1 585 572 .41408 0 3: 3 0 GCTGTCTTTTTGTT 2 3906 3893 .41408 0 3: 3 0 GCTGTGGGTTTGTC NM **** 31(48).Enchanser region of virus LPV SQ aagtctgcanagtctgca AI 00000 2 chain 1 sites find / exp.num. .075 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 603 586 .07459 0 4: 4 0 AAGTCTGCAGAGGTTACT NM **** 34(60).potential core sequence of enhancers of various human viruses SQ cxxxccac CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .738 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 4345 4352 .73767 0 0: 0 0 CAAACCAC NM **** 35(63).enhancer core SV40 SQ tGTGgxxx AI 00000 2 chain 2 sites find / exp.num. .738 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 907 900 .73767 0 0: 0 0 TGTGGTTT 2 3773 3766 .73767 0 0: 0 0 TGTGGTTT NM **** 143(4). PNAS v82 n24 p8325 H21.2.3. Adenovirus E1a core SQ aggaagtgaaa CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .049 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 4068 4078 .04896 0 1: 1 0 AGGAAGTCAAA NM **** 154(20). Mol.Cel.Biol. v5 n4 p649 H21.3.3 SQ ccaccca AI 00000 2 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 503 497 .36890 0 0: 0 0 CCACCCA NM **** 155(21). TC ELEMENT SV40 SQ tccccag AI 00000 2 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5866 5860 .36890 0 0: 0 0 TCCCCAG NM **** 158(26). LVb MOTIF MoMuLV ENHANCER (Mol Cell Biol v7 n3 p1101) SQ caggata CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 1445 1451 .36890 0 0: 0 0 CAGGATA 2 4176 4182 .36890 0 0: 0 0 CAGGATA NM **** 161(30). LYSOZYME SILENCER 1 (EMBO J v6 n8 p2298) SQ anCCTCCTCy CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .230 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 963 972 .23045 0 1: 1 0 CTCCTCCTCC NM **** 165(36). APOLIPOPROTEIN ENHANCER CORE (JBC v263 n34 p18530) SQ ggtgggga-ggggaggg CC distance between two blocks of site: min = 0 max = 2 CC max mismatch in 1-st block: 1, in 2-nd block: 1 AI 00000 1 chain 1 sites find / exp.num. .003 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 5871 5888 .00011 2 1: 1 0 GGTGGGGTcgGGGGAGGG NM **** 173(46).Domen D1 of enchanser of virus AD SQ aggaagtgama CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .092 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 4068 4078 .09216 0 1: 1 0 AGGAAGTCAAA NM **** 177(51).Conservative elements of Ig enchanser(E1,E2,E3,E4,OCTA) SQ tcaagatggc CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .179 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 12 21 .17860 0 1: 1 0 CCAAGATGGC 2 4871 4880 .17860 0 1: 1 0 TCAAGATGGA NM **** 180(55).Conservative elements of Ig enchanser (E1,E2,E3,E4,OCTA) SQ atttgcat AI 00000 2 chain 1 sites find / exp.num. .092 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5307 5300 .09221 0 0: 0 0 ATTTGCAT NM **** 183(59).Conservative elements of Ig enchanser (B,E1,E2,E3) SQ cccatgtggt AI 00000 2 chain 1 sites find / exp.num. .179 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5099 5090 .17860 0 1: 1 0 CCCATGTTGT NM **** 186(64).Direct repeat in mielin proteolipid genes SQ gggaggagrrg CC max mismatch : 1 AI 00000 1 chain 2 sites find / exp.num. .173 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1 11 .17281 0 1: 1 0 GGGGGGAGGAG 2 4029 4039 .17281 0 1: 1 0 GGCAGGAGAAG AI 00000 2 chain 2 sites find / exp.num. .173 interval 1 TD 1 970 960 .17281 0 1: 1 0 AGGAGGAGAGG 2 973 963 .17281 0 1: 1 0 TGGAGGAGGAG NM **** 38(18). AP4 FACTOR Nature v332 1988 p557 SQ yCAGCtgygG AI 00000 2 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 802 793 .36871 0 1: 1 0 TCAGCTGCAG NM **** 39(26). NFY SQ ccaat CC max mismatch : 0 AI 00000 1 chain 10 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 1152 1156 5.90430 0 0: 0 0 CCAAT 2 1470 1474 5.90430 0 0: 0 0 CCAAT 3 1706 1710 5.90430 0 0: 0 0 CCAAT 4 2184 2188 5.90430 0 0: 0 0 CCAAT 5 2340 2344 5.90430 0 0: 0 0 CCAAT 6 3344 3348 5.90430 0 0: 0 0 CCAAT 7 3478 3482 5.90430 0 0: 0 0 CCAAT 8 3584 3588 5.90430 0 0: 0 0 CCAAT 9 3906 3910 5.90430 0 0: 0 0 CCAAT 10 4487 4491 5.90430 0 0: 0 0 CCAAT AI 00000 2 chain 4 sites find / exp.num. 5.904 interval 10 TD 1 1395 1391 5.90430 0 0: 0 0 CCAAT 2 4511 4507 5.90430 0 0: 0 0 CCAAT 3 5741 5737 5.90430 0 0: 0 0 CCAAT 4 5905 5901 5.90430 0 0: 0 0 CCAAT NM **** 40(2). CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC AI 00000 2 chain 3 sites find / exp.num. 1.475 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1278 1268 1.47461 0 0: 0 0 TCTTCCATTGC 2 4772 4762 1.47461 0 0: 0 0 TTCCCCATTGC 3 5735 5725 1.47461 0 0: 0 0 TCATCCATGTC NM **** 187(2.) CRF FACTOR(CCAAT-BOX BINDING FACTOR) SQ tnnnCCatnnC AI 00000 2 chain 3 sites find / exp.num. 1.475 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1278 1268 1.47461 0 0: 0 0 TCTTCCATTGC 2 4772 4762 1.47461 0 0: 0 0 TTCCCCATTGC 3 5735 5725 1.47461 0 0: 0 0 TCATCCATGTC NM **** 192(7). LARGE T PROTEIN OF PAPILLOMA VIRUS SQ xgrggc CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 5.903 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 437 442 5.90332 0 0: 0 0 AGGGGC 2 750 755 5.90332 0 0: 0 0 AGGGGC 3 3520 3525 5.90332 0 0: 0 0 TGAGGC AI 00000 2 chain 4 sites find / exp.num. 5.903 interval 10 TD 1 196 191 5.90332 0 0: 0 0 TGAGGC 2 538 533 5.90332 0 0: 0 0 AGAGGC 3 964 959 5.90332 0 0: 0 0 AGAGGC 4 1232 1227 5.90332 0 0: 0 0 TGAGGC NM **** 193(8). RPG FACTOR SQ tgg-cca CC distance between two blocks of site: min = 7 max = 7 CC max mismatch in 1-st block: 0, in 2-nd block: 0 AI 00000 1 chain 3 sites find / exp.num. 1.474 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 134 146 1.47412 7 0: 0 0 TGGgcgcaggCCA 2 497 509 1.47412 7 0: 0 0 TGGgtggagcCCA 3 5612 5624 1.47412 7 0: 0 0 TGGaaccaacCCA AI 00000 2 chain 3 sites find / exp.num. 1.474 interval 4 TD 1 146 134 1.47412 7 0: 0 0 TGGcctgcgcCCA 2 509 497 1.47412 7 0: 0 0 TGGgctccacCCA 3 5624 5612 1.47412 7 0: 0 0 TGGgttggttCCA NM **** 195(12). AP1-FACTOR SQ tgaztcag AI 00000 2 chain 1 sites find / exp.num. .184 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 238 231 .18442 0 0: 0 0 TGACTCAG NM **** 197(16). SITE 1 J vir.v62 n1 p64 SQ gtgggcgyng CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .046 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 133 142 .04609 0 0: 0 0 GTGGGCGCAG AI 00000 2 chain 1 sites find / exp.num. .046 interval 0 TD 1 370 361 .04609 0 0: 0 0 GTGGGCGTAG NM **** 203(23).Consensus sequence for cAMP receptor protein (CRP or CAP) SQ aantgtganntnnnnca CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .178 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1561 1577 .17839 0 1: 1 0 AATTGTCAGATTCACCA NM **** 204(24).Consensus dc sequence essential for correct transcription of SQ tnatttgcat AI 00000 2 chain 1 sites find / exp.num. .023 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 5309 5300 .02304 0 0: 0 0 TGATTTGCAT NM **** 209(30).Site of initiation of translation in genes of animals SQ zaannatgg CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .738 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 906 914 .73755 0 0: 0 0 CAAAGATGG 2 1352 1360 .73755 0 0: 0 0 GAAATATGG AI 00000 2 chain 1 sites find / exp.num. .738 interval 2 TD 1 5753 5745 .73755 0 0: 0 0 GAATGATGG NM **** 210(32).Optimal sequence for initiation of translation by eukaryotik SQ accatgg CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5672 5678 .36890 0 0: 0 0 ACCATGG NM **** 41(5). HEAt-SHOSK RESPONSIVE ELEMENT SQ ttcnngaa CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. 1.475 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 1500 1507 1.47534 0 0: 0 0 TTCAGGAA 2 2112 2119 1.47534 0 0: 0 0 TTCAGGAA AI 00000 2 chain 2 sites find / exp.num. 1.475 interval 4 TD 1 1507 1500 1.47534 0 0: 0 0 TTCCTGAA 2 2119 2112 1.47534 0 0: 0 0 TTCCTGAA NM **** 44(10). HEAVY METALL RESPONSIVE ELEMENT SQ tgCrcyc CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2335 2341 1.47559 0 0: 0 0 TGCACCC AI 00000 2 chain 2 sites find / exp.num. 1.476 interval 4 TD 1 141 135 1.47559 0 0: 0 0 TGCGCCC 2 5944 5938 1.47559 0 0: 0 0 TGCACCC NM **** 48(33).Consensus sequence of the recognition sites for the glucocorti SQ tgttct CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 2805 2810 1.47583 0 0: 0 0 TGTTCT AI 00000 2 chain 8 sites find / exp.num. 1.476 interval 4 TD 1 929 924 1.47583 0 0: 0 0 TGTTCT 2 1005 1000 1.47583 0 0: 0 0 TGTTCT 3 2650 2645 1.47583 0 0: 0 0 TGTTCT 4 2828 2823 1.47583 0 0: 0 0 TGTTCT 5 4394 4389 1.47583 0 0: 0 0 TGTTCT 6 4586 4581 1.47583 0 0: 0 0 TGTTCT 7 4696 4691 1.47583 0 0: 0 0 TGTTCT 8 5775 5770 1.47583 0 0: 0 0 TGTTCT NM **** 49(23).Site of "drug" induction of genes P-450c SQ znqrgctggg AI 00000 2 chain 1 sites find / exp.num. .184 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5512 5503 .18436 0 0: 0 0 GATGGCTGGG NM **** 235(4). CCCAC-BOX BINDING FACTOR SQ cccac CC max mismatch : 0 AI 00000 1 chain 8 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 279 283 5.90430 0 0: 0 0 CCCAC 2 339 343 5.90430 0 0: 0 0 CCCAC 3 366 370 5.90430 0 0: 0 0 CCCAC 4 506 510 5.90430 0 0: 0 0 CCCAC 5 2403 2407 5.90430 0 0: 0 0 CCCAC 6 2434 2438 5.90430 0 0: 0 0 CCCAC 7 3200 3204 5.90430 0 0: 0 0 CCCAC 8 3899 3903 5.90430 0 0: 0 0 CCCAC AI 00000 2 chain 10 sites find / exp.num. 5.904 interval 10 TD 1 137 133 5.90430 0 0: 0 0 CCCAC 2 700 696 5.90430 0 0: 0 0 CCCAC 3 1703 1699 5.90430 0 0: 0 0 CCCAC 4 3684 3680 5.90430 0 0: 0 0 CCCAC 5 4962 4958 5.90430 0 0: 0 0 CCCAC 6 5207 5203 5.90430 0 0: 0 0 CCCAC 7 5426 5422 5.90430 0 0: 0 0 CCCAC 8 5812 5808 5.90430 0 0: 0 0 CCCAC 9 5876 5872 5.90430 0 0: 0 0 CCCAC 10 5940 5936 5.90430 0 0: 0 0 CCCAC NM **** 236(5). GG.Ar.CC BOX BINDING FACTOR SQ GGxxxxxxCC CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 5522 5531 .36871 0 0: 0 0 GGTATATACC AI 00000 2 chain 1 sites find / exp.num. .369 interval 2 TD 1 5531 5522 .36871 0 0: 0 0 GGTATATACC NM **** 238(7). MOUSE MHC-1 SPECIFIC ELEMENT SQ tggggattcccca CC max mismatch : 2 AI 00000 1 chain 1 sites find / exp.num. .067 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 5462 5474 .06676 0 2: 2 0 TGGCGATTCCTCA NM **** 240(9). MHC X-BOX SQ cccaGmraGxgatg CC max mismatch : 2 AI 00000 1 chain 1 sites find / exp.num. .079 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 1399 1412 .07898 0 2: 2 0 ACCTGAAAGTGATG AI 00000 2 chain 1 sites find / exp.num. .101 interval 1 TD 1 5864 5851 .10129 0 2: 2 0 CCCAGAGTGTGATA NM **** 242(11). ANTITROMBIN-III ENHANCER SPECIFIC FACTOR SQ gtGGxxxg AI 00000 2 chain 1 sites find / exp.num. .738 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 4352 4345 .73767 0 0: 0 0 GTGGTTTG NM **** 246(15). NF-GMB PROTEIN FOR CYTOKIN 2 SPECIFIC SEQUENCE SQ tyaggrta CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 4175 4182 .36884 0 0: 0 0 TCAGGATA AI 00000 2 chain 2 sites find / exp.num. .369 interval 2 TD 1 2327 2320 .36884 0 0: 0 0 TTAGGATA 2 6008 6001 .36884 0 0: 0 0 TTAGGGTA NM **** 247(16). IMMUNOGLOBIN SPECIFIC ELEMENT (pd) SQ tgcactgtgnccag AI 00000 2 chain 1 sites find / exp.num. .067 interval 1 TH num begin end exp.num. dist. mismatch site sequence TD 1 2686 2673 .06675 0 2: 2 0 TGCACTGTGGTCTG NM **** 249(18). MYOSIN ALKALI LIGHT CHAIN SPECIFIC ELEMENT 2 (NAR v16 n21 p1 SQ cccCCacCc CC max mismatch : 1 AI 00000 1 chain 1 sites find / exp.num. .438 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 277 285 .43792 0 1: 1 0 CTCCCACCC AI 00000 2 chain 2 sites find / exp.num. .438 interval 2 TD 1 436 428 .43792 0 1: 1 0 CCCCCAGCC 2 5890 5882 .43792 0 1: 1 0 CCCCCTCCC NM **** 253(22).cycle histone MCB 85 5 2 380 389 SQ GAYTTC CC max mismatch : 0 AI 00000 1 chain 3 sites find / exp.num. 2.952 interval 6 TH num begin end exp.num. dist. mismatch site sequence TD 1 77 82 2.95166 0 0: 0 0 GATTTC 2 4610 4615 2.95166 0 0: 0 0 GACTTC 3 4967 4972 2.95166 0 0: 0 0 GACTTC AI 00000 2 chain 2 sites find / exp.num. 2.952 interval 6 TD 1 4075 4070 2.95166 0 0: 0 0 GACTTC 2 5457 5452 2.95166 0 0: 0 0 GACTTC NM **** 254(23). cycle cell 86 45 4 537 544 trt1 SQ GCGAAA AI 00000 2 chain 1 sites find / exp.num. 1.476 interval 4 TH num begin end exp.num. dist. mismatch site sequence TD 1 5112 5107 1.47583 0 0: 0 0 GCGAAA NM **** 256(25).Cell Cyclic transcription H2B yeast Cell 86 45 4,537-544 SQ gcgaaaaantnrgaac CC max mismatch : 2 AI 00000 1 chain 1 sites find / exp.num. .035 interval 0 TH num begin end exp.num. dist. mismatch site sequence TD 1 5391 5406 .03516 0 2: 2 0 GCGGAGAAATAGGAAC NM **** 258(27).Regulating element of promotor of contractive(KONTRAKTILNIY) SQ cattcct CC max mismatch : 0 AI 00000 1 chain 2 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 3282 3288 .36890 0 0: 0 0 CATTCCT 2 3459 3465 .36890 0 0: 0 0 CATTCCT NM **** 263(32).Sequence repeated 5 times in the promoter of the mouse SQ gaaga CC max mismatch : 0 AI 00000 1 chain 19 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 68 72 5.90430 0 0: 0 0 GAAGA 2 627 631 5.90430 0 0: 0 0 GAAGA 3 1040 1044 5.90430 0 0: 0 0 GAAGA 4 1130 1134 5.90430 0 0: 0 0 GAAGA 5 1214 1218 5.90430 0 0: 0 0 GAAGA 6 1253 1257 5.90430 0 0: 0 0 GAAGA 7 1274 1278 5.90430 0 0: 0 0 GAAGA 8 1539 1543 5.90430 0 0: 0 0 GAAGA 9 1692 1696 5.90430 0 0: 0 0 GAAGA 10 1944 1948 5.90430 0 0: 0 0 GAAGA 11 2170 2174 5.90430 0 0: 0 0 GAAGA 12 3148 3152 5.90430 0 0: 0 0 GAAGA 13 3269 3273 5.90430 0 0: 0 0 GAAGA 14 3320 3324 5.90430 0 0: 0 0 GAAGA 15 4387 4391 5.90430 0 0: 0 0 GAAGA 16 4413 4417 5.90430 0 0: 0 0 GAAGA 17 4922 4926 5.90430 0 0: 0 0 GAAGA 18 5237 5241 5.90430 0 0: 0 0 GAAGA 19 5266 5270 5.90430 0 0: 0 0 GAAGA AI 00000 2 chain 2 sites find / exp.num. 5.904 interval 10 TD 1 4333 4329 5.90430 0 0: 0 0 GAAGA 2 4501 4497 5.90430 0 0: 0 0 GAAGA NM **** 264(33)."CCAAT box";one of a number of homology blocks at the 5'-ends SQ grccaatnr CC max mismatch : 0 AI 00000 1 chain 1 sites find / exp.num. .369 interval 2 TH num begin end exp.num. dist. mismatch site sequence TD 1 3342 3350 .36877 0 0: 0 0 GACCAATAA NM **** 268(37).Consensus sequence of repeated hexanucleotides within the 5'- SQ aarqga CC max mismatch : 0 AI 00000 1 chain 21 sites find / exp.num. 5.903 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 838 843 5.90332 0 0: 0 0 AAAGGA 2 973 978 5.90332 0 0: 0 0 AAAGGA 3 1171 1176 5.90332 0 0: 0 0 AAAGGA 4 1281 1286 5.90332 0 0: 0 0 AAATGA 5 1290 1295 5.90332 0 0: 0 0 AAATGA 6 1302 1307 5.90332 0 0: 0 0 AAGGGA 7 1333 1338 5.90332 0 0: 0 0 AAATGA 8 1405 1410 5.90332 0 0: 0 0 AAGTGA 9 1584 1589 5.90332 0 0: 0 0 AAATGA 10 1637 1642 5.90332 0 0: 0 0 AAAGGA 11 1777 1782 5.90332 0 0: 0 0 AAGTGA 12 1881 1886 5.90332 0 0: 0 0 AAAGGA 13 2159 2164 5.90332 0 0: 0 0 AAAGGA 14 2291 2296 5.90332 0 0: 0 0 AAGGGA 15 2784 2789 5.90332 0 0: 0 0 AAATGA 16 3093 3098 5.90332 0 0: 0 0 AAAGGA 17 3172 3177 5.90332 0 0: 0 0 AAATGA 18 4312 4317 5.90332 0 0: 0 0 AAGGGA 19 4771 4776 5.90332 0 0: 0 0 AAAGGA 20 5533 5538 5.90332 0 0: 0 0 AAATGA 21 5698 5703 5.90332 0 0: 0 0 AAATGA AI 00000 2 chain 5 sites find / exp.num. 5.903 interval 10 TD 1 229 224 5.90332 0 0: 0 0 AAGGGA 2 3517 3512 5.90332 0 0: 0 0 AAATGA 3 3947 3942 5.90332 0 0: 0 0 AAGGGA 4 4845 4840 5.90332 0 0: 0 0 AAGGGA 5 5719 5714 5.90332 0 0: 0 0 AAAGGA NM **** 271(41).Sequence frequently found in the promoter region of histone H SQ cgcac CC max mismatch : 0 AI 00000 1 chain 4 sites find / exp.num. 5.904 interval 10 TH num begin end exp.num. dist. mismatch site sequence TD 1 156 160 5.90430 0 0: 0 0 CGCAC 2 256 260 5.90430 0 0: 0 0 CGCAC 3 321 325 5.90430 0 0: 0 0 CGCAC 4 5946 5950 5.90430 0 0: 0 0 CGCAC AI 00000 2 chain 2 sites find / exp.num. 5.904 interval 10 TD 1 157 153 5.90430 0 0: 0 0 CGCAC 2 166 162 5.90430 0 0: 0 0 CGCAC