General information

How to cite RegScan

RegScan Workgroup

RegScan  publications

User's guide


Description of:

Search for degenerate oligonucleotide motifs (ARGO)

ARGO_VIEW program

RecGroup program

RGSiteScan program

MMSite2 program

MultAlig program

Recog program

PolIIIScan program



RegScan publications

Vityaev E.E, Podkolodny N.L., Vishnevsky O.V., Kosarev P.S., Ananko E.A., Ignatieva E.V., Podkolodnaya O.A., Kolchanov N.A. Detecting patterns of structure-function organization of regulatory genomic sequences in a first order logic.// Proc. or the second international conference on bioinformatics of genome regulation and structure, BGRS-2000, Vol 2, ICG, Novosibirsk.

Ponomarenko M.P., Ponomarenko J.V., Frolov A.S., Podkolodnaya O.A., Vorobyev D.G., Kolchanov N.A., Overton G.C.. Oligonucleotide frequency matrices addressed to recognizing functional DNA sites. Bioinformatics 1999 Jul-Aug;15(7-8):631-43 ML 99419254

Vishnevsky O. V., Podkolodnaya O.A., Babenko V.N. Search for degenerate oligonucleotide motifs in transcription factor binding sites and eukaryotic promoters (the system ARGO). Proceedings of the First International Conference on Bioinformatics of Genome Regulation and Structure, 1998, V.1, P. 144-146.


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