SiteGA Site recognition by Genetic Algorithm

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TF short name	Threshold selection: Threshold; FN rate; FP rate	TF full name	SWISS-PROT references for TF	Binding sites on DNA: training set from TRRD	All TRRD sites of this type
E2F		E2F	MENU	40 E2F sites	E2F
HNF4		Hepatic Nuclear Factor 4	MENU	29 HNF4 sites	HNF4
IRF1		Interferon Regulatory Factor 1	MENU	28 IRF1 sites	IRF1
ISGF3		Interferon Stimulated Gene Factor 3	MENU	25 ISGF3 sites +2 no in TRRD	ISGF3
NFkB		Nuclear Factor-kappa-B	MENU	43 NFkB sites	NFkB
PPAR		Peroxisome Proliferator-Activated Receptor	MENU	37 PPAR sites	PPAR
SF1		Steroidogenic Factor 1	MENU	53 SF1 sites	SF-1
SREBP		Sterol Regulatory Element Binding Protein	MENU	37 SREBP sites	SREBP
STAT1		Signal Transducer and Activator of Transcription 1	MENU	27 STAT1 sites +5 no in TRRD	STAT1

All TF

The research was partially supported by the Russian Foundation for Basic Research (RFBR)

Author: Victor Levitsky, Genaev Misha
Contributors: Sergey V. Lavryushev
Leader: Prof. N.A. Kolchanov