Analyzed Region
This field indicates the DNA region, for which the weight matrix was constructed. Positions are given in bp relative to the first position of the site core multiply aligned by the Gibbs potential function (Lawrence C., 1994, Comput. Chem., 18, 255-258) (see
ALIGNED database).
Example
Analyzed Region
-10 22
This field could be numerously repeated in accordance with the blocks referring to each matrix:
Oligonucleotide Alphabet Length
Means, Standard Deviation, False Negatives for Control Sequences
Means, Standard Deviation, False Positives for Random Sequences