PDBSITE publications

2000

Ivanisenko V.A., Grigorovich D.A., Kolchanov N.A. PDBSite: a database on biologically active sites and their spatial surroundings in proteins with known tertiary structure. // The Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2000), Novosibirsk, Russia, August 7 - 11, 2000, Vol. 2, pp. 171-174.

D.A.Grigorovich, V.A. Ivanisneko. The EnPDB database on DNA, RNA and protein 3-dimensional structures. // Computational Technologies, 2000. Vol. 5, pp. 64-66.

Grigorovich D.A.,Ivanisenko V.A., Kolchanov N.A. Structure and format of the EnPDB database accumulating spatial structures of DNA, RNA and proteins. // The Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2000), Novosibirsk, Russia, August 7 - 11, 2000, Vol. 2, pp. 127-129.

Valuev V.P., Afonnikov D.A., Petrenko O., Beylina A.G., Lokhova I.V., Grigorovich D.A., Fokin O.N., Ivanisenko V.A. The database ASPD on experiments with application of phage display technique. // The Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2000), Novosibirsk, Russia, August 7 - 11, 2000, Vol. 2, pp. 160-163.

Orlov Yu.L., Ivanisenko V.A., Potapov V.N. Context dependencies in amino acid sequencies of protein domains. // The Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2000), Novosibirsk, Russia, August 7 - 11, 2000, Vol. 2, pp. 211-215

Kolchanov N.A., Podkolodny N.L., Ponomorenko M.P., Ananko E.A., Ignatieva E.V., Kolpakov F.A., Levitsky V.G., Podkolodnaya O.A., Stepanenko I.L., Merkulova T.I., Vorobiev D.G., Lavryushev S.V., Grigorovich D.A., Ponomorenko J.V., Kochetov A.V., Orlova G.V., Kondrakhin Y.V., Titov I.I., Vishnevsky O.V., Orlov Yu.L., Valuev V.P., Ivanisenko V.A., Oshepkov D.Yu., Omel'yanchuk N.A., Pozdnyakov M.A., Kosarev P.S., Goryachkovskaya T.N., Fokin O.N., Kalinichenko L.A., Kotlyarov Yu.V. Integrated system on gene expression regulation GENEEXPRESS-2000. // The Second International Conference on Bioinformatics of Genome Regulation and Structure (BGRS'2000), Novosibirsk, Russia, August 7 - 11, 2000, Vol. 1, pp. 12-17

Kolchanov N.A, Podkolodny N.L., Ponomorenko M.P.,Vityaev E.E., Ivanisenko V.A. Data analysis and knowledge production in GeneExpress system - digital library on structure and function of DNA, RNA and proteins. // Second Russian National Conference on DIGITAL LIBRARIES: ADVANCED METHODS AND TECHNOLOGIES, DIGITAL COLLECTIONS. September 26-28, 2000, Protvino, Russia.

1999

Ivanisenko V.A., Grigorovich D.A., Afonnikov D.A., Kuropatov D.A., Valuev V.P., Kolchanov N.A. An informational system FrameProt on three-dimensional structures of DNA, RNA and proteins integrated with GeneExpress. // First Russian National Conference on DIGITAL LIBRARIES: ADVANCED METHODS AND TECHNOLOGIES, DIGITAL COLLECTIONS. October 19-21, 1999, Saint-Petersburg, Russia. P. 175-186.